Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01532 ATGGAGTCCCTTGGCTTCATGGATGACCTCATGGACTTCTCGTTAGATATACCTGAGGAAGATGACGACGAAGGAAAACCTGGTAAGGTCTGTCCAATTCCTCCAAATTCCAGGAATCCTGCATCTTGCAATGTTCCAGACCCAGAGGATCCTAGCCGATTGTTGCCTGAGTCTGCAGAAGAAGAAGAACTTGAATGGTTATCTAACAAAGATGCATTCCCTGCTATTGAATCATGTGTTGACATTCTCTGTGACCAACTGATCACCAAAGCAAAGCATGAAAACTCAGATTCGTTGCTTAAATACAGCAATAGCAGCAGCAACAGAACCAATGGTGTTAACAGCAGTATCCTCATGAGCTGCTTTGCTAACCTGAAGGTTCCTGTACGGGCACGAAGCAAGAATTGTCGTAAACCACACCATAGCCCGGCTGACATTTCGAGCTATCAGTTTTGCCATATCCAACCAAATAGCAATGTTGCTAAAGTAGAACCTTCTGCAAAACACTCAACAATTGGGAGGAAATGCCAACACTGCGGAGCAGAAAAGACACCTCAATGGCGTGCAGGTCCCCATGGACCAAAAACCCTCTGTAATGCTTGTGGAGTACGATACAAATCAGGTCGACTTGTTCCGGAGTATCGCCCTGCAAGTAGCCCAACTTTCCGTAGTGAATTGCATTCAAATCTGCACAGAAAGGTTATACAGATGAGGAAGCAAAAGCAACTAGGGATGGTAGTGAATTCTGTGGATGATGGTTGA 762 0.4514 MESLGFMDDLMDFSLDIPEEDDDEGKPGKVCPIPPNSRNPASCNVPDPEDPSRLLPESAEEEELEWLSNKDAFPAIESCVDILCDQLITKAKHENSDSLLKYSNSSSNRTNGVNSSILMSCFANLKVPVRARSKNCRKPHHSPADISSYQFCHIQPNSNVAKVEPSAKHSTIGRKCQHCGAEKTPQWRAGPHGPKTLCNACGVRYKSGRLVPEYRPASSPTFRSELHSNLHRKVIQMRKQKQLGMVVNSVDDG* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01532 253 ProSitePatterns GATA-type zinc finger domain. 176 201 IPR000679 GO:0006355|GO:0043565
Pte11g01532 253 ProSiteProfiles GATA-type zinc finger domain profile. 170 206 IPR000679 GO:0006355|GO:0043565
Pte11g01532 253 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 172 233 - -
Pte11g01532 253 MobiDBLite consensus disorder prediction 1 55 - -
Pte11g01532 253 CDD ZnF_GATA 175 223 IPR000679 GO:0006355|GO:0043565
Pte11g01532 253 PANTHER GATA TRANSCRIPTION FACTOR 37 242 - -
Pte11g01532 253 SMART GATA_3 170 220 IPR000679 GO:0006355|GO:0043565
Pte11g01532 253 Pfam GATA zinc finger 176 209 IPR000679 GO:0006355|GO:0043565
Pte11g01532 253 Gene3D - 171 244 IPR013088 GO:0006355|GO:0008270
Pte11g01532 253 FunFam GATA transcription factor 166 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01532 Pte-Chr11 33793038 33795988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01532 1 244 C2C2-Gata Transcription Factor Family AT3G24050 43.750 1.24e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte11g01532 GATA 3.1e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01532 - - qsa:O6P43_022116 315.849