Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01519 ATGACCAACCTTGGTACAGAGCTGAGATTAGTATATTTGATGCATGTTTTGATTACTTTGGCCATGCAGGCTTCTCGTTTTCCTGTGGGATCTCTTGTTTGGGTGCACGACCCAGATGTAGCTTGGATAGATGGTGAAGTTGTTGAAGTTAATGGCGACGAGGTTAAAGTTCAAACAACATCGGGGAAAATGGTCGCAGAAAAAGTACCAGATGTTCATCCAAAAGACCCTGAATTTCCCCAATGTGGCACAGATGATATGACAAAGTTGGCGTATCTGCATGAACCCGGCGTTCTCTTGAATTTAAGATGTCGATATGATATTGACGAAATATATACCTACACAGGAAATATACTTATAGCTGTGAATCCTTTTCGAAGGTTGCCTCATTTATATAGCAATCATGTGATGGAACAGTACAAAGCAGCAGCTACTAGTGAGCTTGCCCCACATCCGTTTGCAATTGCACATTTAGCATACAGGTCGATGATTAATGAGGGAGTAAGCCAGTCAATTCTTGTTAGCGGTGAAAGTGGAGCTGGAAAGACGGAAAGCACAAAGATGCTTATGCAATATCTTGCCTACATGGGAGGAAGAGCTGCGGGTGATGGAAGGTCTGTGGAGCAACAAGTCTTGGAGTCTAATCCTGTCCTTGAAGCATTTGGAAACGCGAAGACTGTGAGAAATAACAATTCAAGCCGTTTTGGTAAGTTTGTGGAGCTTCAGTTTGATCAGAGTGGGAGAATATCAGGAGCTGCAATCAGAACCTATCTGCTGGAAAGGTCCCGCGTCTGTCAAGTATCTGATCCGGAGCGAAATTATCATTGCTTCTATATGCTTTGTGCTGCACCTAAAGAGGAAGTTGAGAGGTACAAACTGGGAAATCCTAGATCATTTCATTATTTGAATCAATCAAATTTCTATGAACTGGATGGTGTGGATGAATCCAAGGAATACCTTGAAACTAGAAGAGCCATGGCTGTCGTGGGGATCTGTTCTGAAGAGCAGGATGCAGTATTCCGAGTAATAGCTGCAGTACTCCATTTAGGAAACATTGAATTTGATAAGGGAGATGATGCAGATTCTTCCAAACCCAAGGATGATAACTCCTTTTTTCACCTGAAAACAGCAGCTAAGCTACTCATGTGCGATGAGAAGTCTCTTGAGGACTCTCTGTGCAAACGGATCATTGTGACACGTGACGAGTCTATTACAAAGGCGCTTGATCCAAACTCTGCAGCAGTCAATAGGGACGCCTTGGCTAAGATAGTCTATTCCAGGTTATTTGATTGGATTGTAAACAAGATCAACAACTCTATTGGTCAAGATCCTAATTCAAAGACTTTAATCGGGGTGCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGTATCAATTTGACGAATGAAAAATTGCAGCAACATTTCAACCAGCATGTTTTCAAGATGGAGCAAGAAGAATATACTAAGGAAGAAATAGATTGGAGCTATATCGAGTTTGTTGATAATCAAGATATCCTTGATCTTATTGAAAAGAAACCTGGAGGCATCATCGCTCTTCTAGATGAGGCTTGTATGTTTCCACGATCAACACACGAGACATTTGCACAGAAGTTATATCAAACTTTCAAAGACCGTAAGCGTTTCAGCAAGCCGAAGTTATCTCAAACTGACTTTACCATAAGTCATTATGCTGGTGATGTCACATATCAAACTGATTTTTTTCTTGATAAGAACAAAGACTACGTTGTTCCGGAGCATCAGGCACTGCTGAGTGAATCTAAGTGCTCTTTTGTATCAGGGTTGTTCCCTCCTCTACGTGAGGAGTCCTCCAAATCATCAAAGTTCTCTTCAATAGCTTCTCTATTTAAGAGCCAACTGCAAACATTGCTTGAAACCTTAAATGCTACTGAGCCACATTATGTTCGCTGCATAAAGCCAAACAATCTTCTTAAGCCGGGTATATTTGAGAACAATAATATCCTGCAACAACTTCGATGTGGAGGAGTCATGGAGGCAATACGTATCAATCTTGCTGGTTATCCGACTAGAAAGACATTTAATGAATTTGTACGACGTTTTAGCATTCTGGCACCTGATTCGTTGCATGGATGTTCGGATGAAGTTACTGCATGCAAGAGGATTCTCAAGGAAGTGGACCTCAAAGGTTGTCAGATTGGAAAAACCAAAGTGTTCCTGAGAGCAGGTCAGATGGCAGAACTGGACGCATTCCGAAGTGAGGTCTTGGGAAGTTCAGCATCAGTTATTCAGAGAAAAGTCCGTTCACACATATGTCGTAGACAATTCATCTTATTTAGACTTTCAGCTGTTCAAATTCAAACTATCTGCAGAGGGCAAGTCGCACGTCGACGATATGAGAATAAAAGGAGAGAAGCTGCGTCAGTCATAATCCAGAAACACAGTCGAGCATGCCTTTCACGGAGAGCTTACAAAAGCTGGTGTTCTTCTGCTCTTCATATTCAAACTGGTATGCGAGTGATGGCTGCTCGAAATGAGCTCAACTTAAGAAGGCAGGCAAGGGCTGCAATAATTATTCAGAGTCAATGCAGAAAACATCTATCCCGTGTTCATTTCCTGAGGTTGAAGAAAGCAACGATTTCCACACAGTGTGCCTGGAGGGTGAAAGTAGCACGTAGAGAGCTTCGAAAGCTTAAAATGGCTGCTAAAGAAACCGGTGCTTTGCAAGCTGCCAAAAGTAAATTGGAAAAGGAAGTTGAAGAGTTAGCCTGGCGTTTGCAGTTGGAGAAACAGAATAGGGCGGATATGGAACAACAATTTCGAGAAACTAAAGAACATCTTACCCGGGAGCTTGAGGATGCCAGGAGTGCAGCTGGGAAAGTTTCAATCACACAGGAGGTTCCTGTTTCTGATAACCAATTAATAAATAATCTTACCATCGAAAACGAACAACTCAAGGCACTGGTTAGTTCATTGGAAAAGAAAATTGATGAAACAGAAAAGAAATATGAAGAAAGTAACAAGCTCAGTGAAGAGAGGTTGAAGCAGGCGTTAGATGCAGAGGCAAAAATAATAGAACTAAAGACTTCTATGCAAAGGCTTCAAGAAAAACTTTCAGATATGGAAATTGAGGATCAAATTTTGCGGCAGCAAGCACTAATGAACTCGTCTTCTATGCAAAACTCTGCAGCTCAGCCTAAAGAAAATGGTCATCCTGAATCTCATGGGGGTATTCCTGCGAAAAGTTTTGGTATAGCATCCAAAAAGTTTGGTACAGATTCCAAAAAGTTTGCTTTTGGTACTGGATCCAAAAGATATGGTCATGGAATGGCATCCAAAAAGTTCGGGTCAGAGTCTCTTCGGAGATCACAAATTGAAAGGCAACATGAGAGTTTGGATGCTCTTATCAAATGTGTGACACAAAATCTTGGGTTTAGTGAAGGAAAACCAGTTGCGGCATTTACCATATACAAGTGTTTGCTGCACTGGAGGTCATTTGAAGCAGAAAAGACAAGTGTTTTTGATCGACTTATTCGATTAATTGAATCTTCTGTAGAGAACCCAGACAACAATGAACATTTGGCATACTGGCTGTCCAATGCATCTATGTTGTTATTAATGCTACAGCGGAGCTTGAAAGCAAATGCCCCACGGTTGCCTCCGACCCCAACATCTTTCTTTGGGAGGATGGCTCAAAGTTTTCGTGGTTCTTCCGCCAATCTTTCAGTTAGTATAGTACGCCATGTAGAGGCCAAGTATCCAGCAATGCTATTCAAGCAGCAGCTTGAACTATATGTAGATATATTATATGGAATCATCCGCGACAATTTCAAGAAAGACCTCTCGCCTCTTCTTTCCACTAGCATTCTGGAGCCGAAAACATCAGTCACAAAATCTCCTGAACAGGAACATAGTGAAACCCCGAGTGCAAACCCTTGGAAGGGCATCATCGACAGCCTCAGCAGATTTCGCAATACAATGAGAGAGAATTGTGTTCCGTCCATTCTAGTTCAGAATGTTTTTACTCAAGTCTTCTCATATATCAACACGCAGCTCTTTAATAGCCTTCTTCAGCGACGAGAATGCTGCACTTTCAGTAATGGAGAATATCTCAAATATGGATTAACTGAACTAGAAACATGGTGTAAACAAGAACGCGAGTTCGTTGGCTCATCTTGGGATGAACTGAAACATTTGAGGCAGGCAGTTGGATTCTTGGTTATAAATCAGAAGTCCAAAATTTCATACGATGAGATCACTAACGACCTCTGTCCTGTCTTGAATGTTCAACAACTTGACAGGATATGTACGATGTATTCTGACGATGACTACAATACTAGTGGAGTATCACCAGAAGTCATCTCTAGTATGAAACTTATTATAACAGATGATTCAGATATTAATTCATTTTTATTGGACGACAATTCCAGCTCTCCGCTCTCACTTGATAATATCTCCGATGCCTTTGAGGATAGGAACTTTTCAGACGTGAAACATCCTGCCGAACTAATGGAGGATCCAGGCTTCCAGTTTTTACAAGAATGA 4542 0.413 MTNLGTELRLVYLMHVLITLAMQASRFPVGSLVWVHDPDVAWIDGEVVEVNGDEVKVQTTSGKMVAEKVPDVHPKDPEFPQCGTDDMTKLAYLHEPGVLLNLRCRYDIDEIYTYTGNILIAVNPFRRLPHLYSNHVMEQYKAAATSELAPHPFAIAHLAYRSMINEGVSQSILVSGESGAGKTESTKMLMQYLAYMGGRAAGDGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDQSGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEEVERYKLGNPRSFHYLNQSNFYELDGVDESKEYLETRRAMAVVGICSEEQDAVFRVIAAVLHLGNIEFDKGDDADSSKPKDDNSFFHLKTAAKLLMCDEKSLEDSLCKRIIVTRDESITKALDPNSAAVNRDALAKIVYSRLFDWIVNKINNSIGQDPNSKTLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDRKRFSKPKLSQTDFTISHYAGDVTYQTDFFLDKNKDYVVPEHQALLSESKCSFVSGLFPPLREESSKSSKFSSIASLFKSQLQTLLETLNATEPHYVRCIKPNNLLKPGIFENNNILQQLRCGGVMEAIRINLAGYPTRKTFNEFVRRFSILAPDSLHGCSDEVTACKRILKEVDLKGCQIGKTKVFLRAGQMAELDAFRSEVLGSSASVIQRKVRSHICRRQFILFRLSAVQIQTICRGQVARRRYENKRREAASVIIQKHSRACLSRRAYKSWCSSALHIQTGMRVMAARNELNLRRQARAAIIIQSQCRKHLSRVHFLRLKKATISTQCAWRVKVARRELRKLKMAAKETGALQAAKSKLEKEVEELAWRLQLEKQNRADMEQQFRETKEHLTRELEDARSAAGKVSITQEVPVSDNQLINNLTIENEQLKALVSSLEKKIDETEKKYEESNKLSEERLKQALDAEAKIIELKTSMQRLQEKLSDMEIEDQILRQQALMNSSSMQNSAAQPKENGHPESHGGIPAKSFGIASKKFGTDSKKFAFGTGSKRYGHGMASKKFGSESLRRSQIERQHESLDALIKCVTQNLGFSEGKPVAAFTIYKCLLHWRSFEAEKTSVFDRLIRLIESSVENPDNNEHLAYWLSNASMLLLMLQRSLKANAPRLPPTPTSFFGRMAQSFRGSSANLSVSIVRHVEAKYPAMLFKQQLELYVDILYGIIRDNFKKDLSPLLSTSILEPKTSVTKSPEQEHSETPSANPWKGIIDSLSRFRNTMRENCVPSILVQNVFTQVFSYINTQLFNSLLQRRECCTFSNGEYLKYGLTELETWCKQEREFVGSSWDELKHLRQAVGFLVINQKSKISYDEITNDLCPVLNVQQLDRICTMYSDDDYNTSGVSPEVISSMKLIITDDSDINSFLLDDNSSSPLSLDNISDAFEDRNFSDVKHPAELMEDPGFQFLQE* 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01519 1513 SMART DIL_2 1338 1444 IPR002710 -
Pte11g01519 1513 SMART iq_5 802 824 IPR000048 GO:0005515
Pte11g01519 1513 SMART iq_5 850 872 IPR000048 GO:0005515
Pte11g01519 1513 SMART iq_5 777 799 IPR000048 GO:0005515
Pte11g01519 1513 SMART iq_5 754 776 IPR000048 GO:0005515
Pte11g01519 1513 SMART iq_5 873 895 IPR000048 GO:0005515
Pte11g01519 1513 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 28 77 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 Pfam DIL domain 1339 1441 IPR002710 -
Pte11g01519 1513 PANTHER MYOSIN 844 1450 - -
Pte11g01519 1513 PRINTS Myosin heavy chain signature 216 243 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 PRINTS Myosin heavy chain signature 112 131 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 PRINTS Myosin heavy chain signature 449 477 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 PRINTS Myosin heavy chain signature 169 194 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 PRINTS Myosin heavy chain signature 502 530 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 Gene3D Myosin VI head, motor domain, U50 subdomain 332 621 - -
Pte11g01519 1513 ProSiteProfiles IQ motif profile. 851 880 IPR000048 GO:0005515
Pte11g01519 1513 Gene3D - 272 330 - -
Pte11g01519 1513 SMART MYSc_2a 76 753 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 FunFam unconventional myosin-Va 853 901 - -
Pte11g01519 1513 ProSiteProfiles IQ motif profile. 874 903 IPR000048 GO:0005515
Pte11g01519 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 805 IPR027417 -
Pte11g01519 1513 CDD MYSc_Myo11 96 740 IPR036018 -
Pte11g01519 1513 Pfam Myosin N-terminal SH3-like domain 30 65 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 MobiDBLite consensus disorder prediction 1054 1075 - -
Pte11g01519 1513 Gene3D - 31 75 IPR008989 GO:0003774|GO:0005524|GO:0051015
Pte11g01519 1513 Coils Coil 911 956 - -
Pte11g01519 1513 Gene3D Kinesin motor domain 85 682 IPR036961 -
Pte11g01519 1513 Gene3D - 853 902 - -
Pte11g01519 1513 Gene3D - 805 852 - -
Pte11g01519 1513 Gene3D - 755 804 - -
Pte11g01519 1513 Gene3D - 686 753 - -
Pte11g01519 1513 FunFam Myosin 2 332 447 - -
Pte11g01519 1513 ProSiteProfiles Myosin motor domain profile. 82 752 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 804 903 IPR027417 -
Pte11g01519 1513 Coils Coil 974 1050 - -
Pte11g01519 1513 CDD MyosinXI_CBD 1125 1482 IPR037975 GO:0007015
Pte11g01519 1513 Gene3D - 459 643 - -
Pte11g01519 1513 Pfam Myosin head (motor domain) 84 740 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01519 1513 ProSiteProfiles IQ motif profile. 779 807 IPR000048 GO:0005515
Pte11g01519 1513 Pfam IQ calmodulin-binding motif 805 824 IPR000048 GO:0005515
Pte11g01519 1513 Pfam IQ calmodulin-binding motif 853 871 IPR000048 GO:0005515
Pte11g01519 1513 Pfam IQ calmodulin-binding motif 757 775 IPR000048 GO:0005515
Pte11g01519 1513 Pfam IQ calmodulin-binding motif 781 798 IPR000048 GO:0005515
Pte11g01519 1513 FunFam Myosin heavy chain 272 327 - -
Pte11g01519 1513 ProSiteProfiles Dilute domain profile. 1174 1462 IPR002710 -
Pte11g01519 1513 FunFam Class V myosin 459 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01519 Pte-Chr11 33626998 33650746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01519 29 1512 Myosins gene family AT5G43900 64.029 0.0 1988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01519 K10357 - qsu:112008315 2138.61