Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01512 ATGGCTGCCGAAATTGCTACTGAAGTTGGCAAATCTGAAGATCATGAGGTCAAGCTTTTCAATCGTTGGAGCTTTGATGACGTTCAGGTCAATGATATTTCACTGGCTGATTATATTGGTGTGGTGCCGTCAAAACATGCTACCTATGTTCCACACACTGCTGGAAGGTACTCTGTAAAGAGGTTTAGAAAAGCCCAGTGCCCAATAGTGGAGAGGTTGACAAATTCATTGATGATGCATGGTAGAAACAATGGGAAGAAACTTATGGCTGTGAGAATTATCAAGCATGCCATGGAAATCATCCATCTCTTGACTGATCAAAATCCAATTCAAATCATTGTTGATGCCATCATCAACAGTGGGCCACGTGAAGATGCTACACGTATTGGGTCAGCTGGAGTTGTTAGGCGTCAGGCTGTTGACATATCACCTCTGCGCCGTGTGAATCAGGCCATTTATCTTCTTACAACAGGTGCACGTGAAGCTGCATTTAGAAACATCAAGACCATAGCAGAATGTTTGGCAGATGAGCTTATTAATGCAGCAAAGGGATCATCCAACAGCTACGCAATCAAGAAGAAGGATGAGATCGAGCGTGTTGCAAAGGCTAACCGTTGA 618 0.4369 MAAEIATEVGKSEDHEVKLFNRWSFDDVQVNDISLADYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQIIVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01512 205 CDD uS7_Eukaryote 18 205 IPR005716 GO:0003735|GO:0006412|GO:0015935
Pte11g01512 205 PANTHER RIBOSOMAL PROTEIN S7 12 205 IPR000235 GO:0006412
Pte11g01512 205 Pfam Ribosomal protein S7p/S5e 59 205 IPR023798 -
Pte11g01512 205 SUPERFAMILY Ribosomal protein S7 18 205 IPR036823 -
Pte11g01512 205 FunFam 40S ribosomal protein S5 1 205 - -
Pte11g01512 205 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 205 IPR000235 GO:0006412
Pte11g01512 205 ProSitePatterns Ribosomal protein S7 signature. 71 97 IPR020606 GO:0003723|GO:0003735|GO:0006412
Pte11g01512 205 Gene3D Ribosomal protein S7 domain 2 205 IPR036823 -
Pte11g01512 205 NCBIfam 30S ribosomal protein S7 16 205 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01512 Pte-Chr11 33559152 33560314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01512 2 206 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 89.268 8.45e-138 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01512 K02989 - cpap:110810728 371.703