Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01510 ATGGCTCCTGACAGTGGCTGGACAAATATCAATGGACATCATGGGAATGGCATGTGTTTCTTTCGTATAATTCTACCCCATAATCTTGAAGAAGGAACACTTAGGCTTCCAGAGAAGTTTGTACGTATATATGGAAAATGCTTGCCAAATCCAGTGGCGCTTCGCCTTCCCAACGGAACAATTTGGACAGTGAAGTGGACAACTTGCAATAATGCTATTTGTTTCCAAGAAGGGTGGAGAGAATTTGCAGAGTACCTCTCCCTGGACTTGGGTCATTTTCTGTTGTTCAAATATGAGGGGAATTGTCATTTTCATGTCATGATTTTTGATAAGAGTACCACAGAGGTTGATTACCCTTCCAATTTTGGCAACAATGGGGACAATACCAATTTGGCTCAAGAGACAGAATATCAGAATATCGATGTTGATGCTGATGAGAGTGATGATGACTCTGTTGTGTTCTTAGGAGAATCAACACTATCCCCCGAAGGTATATGA 498 0.4137 MAPDSGWTNINGHHGNGMCFFRIILPHNLEEGTLRLPEKFVRIYGKCLPNPVALRLPNGTIWTVKWTTCNNAICFQEGWREFAEYLSLDLGHFLLFKYEGNCHFHVMIFDKSTTEVDYPSNFGNNGDNTNLAQETEYQNIDVDADESDDDSVVFLGESTLSPEGI* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01510 165 Pfam B3 DNA binding domain 25 111 IPR003340 GO:0003677
Pte11g01510 165 Gene3D - 14 114 IPR015300 -
Pte11g01510 165 ProSiteProfiles B3 DNA-binding domain profile. 19 112 IPR003340 GO:0003677
Pte11g01510 165 SMART B3_2 20 112 IPR003340 GO:0003677
Pte11g01510 165 CDD B3_DNA 19 110 IPR003340 GO:0003677
Pte11g01510 165 PANTHER B3 DOMAIN-CONTAINING 15 131 - -
Pte11g01510 165 SUPERFAMILY DNA-binding pseudobarrel domain 18 112 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01510 Pte-Chr11 33555554 33556264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01510 20 119 B3 DNA Binding Superfamily AT4G01580 41.000 1.76e-24 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte11g01510 B3 2.6e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01510 - - gra:105775884 130.568