Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01482 ATGGTTTCACTGAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTGAAGTGCGGTAGAGGCAAGGTCTGGCTTGACCCAAATGAAGTCAATGAAATCTCCATGGCAAACTCTCGCCAGAACATCCGGAAGTTGGTTAAGGATGGGTTCATCATCAGGAAGCCTACAAAAATTCATTCTCGTTCACGTGCCAGGCGAATGAAAGAGGCAAAGAGGAAGGGTCGCCACTCTGGATATGGTAAGCGGAAAGGTACGAGGGAAGCTAGGCTGCCCACCAAAATCCTTTGGATGAGGAGAATGCGTGTCTTGAGGCGCCTGCTCCGCAAGTACAGGGAGGCAAAGAAGATAGACAAACACATGTACCATGACATGTATATGAAGGTAAAGGGTAATGTTTTCAAGAATAAGAGGGTTCTGATGGAGAGCATTCACAAGTCCAAGGCTGAGAAGCAAAGGGAGAAGACTTTGTCTGACCAGTTCGAGGCAAAACGTGCCAAGAACAAAGCCAGCAGGGAACGGAAAAATGCTAGAAGAGAGGAACGCTTGAATCAGGTTATATTTCTCTTAGTTTTCTTCACCTTTTTTGGCATTTTTATGCTTGAGATTTTATTTATTTGCTGCATCTTATGGGCTTGTAACTCTTACTTTTCATAA 651 0.4501 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKQREKTLSDQFEAKRAKNKASRERKNARREERLNQVIFLLVFFTFFGIFMLEILFICCILWACNSYFS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01482 216 MobiDBLite consensus disorder prediction 144 174 - -
Pte11g01482 216 FunFam Ribosomal protein L19 57 187 - -
Pte11g01482 216 FunFam Ribosomal protein L19 1 56 - -
Pte11g01482 216 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pte11g01482 216 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Pte11g01482 216 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pte11g01482 216 MobiDBLite consensus disorder prediction 57 85 - -
Pte11g01482 216 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Pte11g01482 216 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Pte11g01482 216 Gene3D - 57 187 - -
Pte11g01482 216 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Pte11g01482 216 PANTHER 60S RIBOSOMAL PROTEIN L19 1 183 IPR039547 GO:0003723|GO:0003735|GO:0022625
Pte11g01482 216 MobiDBLite consensus disorder prediction 57 79 - -
Pte11g01482 216 Coils Coil 158 181 - -
Pte11g01482 216 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01482 Pte-Chr11 33246953 33249136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01482 1 183 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 89.617 4.07e-117 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01482 K02885 - gmx:100499883 346.28