Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01481 ATGGCTACTGCAACGTACCCACCTCTGCCTCCTTTCTATAGACTCTATGAAGATTACTTACAAAACCCTAAATCCGCTCCTGAACCTCCTCCTCCAATTGAAGGCACCTACGTTTGTTTTGGAGGCACCTACACTACTGATGATGTGCTACCAAGCCTAGAAGAGCAGGGAGTGCGCCAGCTGTACCCCAAAGGATCTAATGTGGGTAAGTGGGATGGTTCTTGTGAAATGTTGACCAAAATGGTGGTTTGTTGTTGTGGCCGCCGCTGTAACATTGAGGTCTTTGGTGATGGTTGTGATGCTATTGAAATGTTATCGTACTGTGAATGGAATGATAATCGTGATGGAAGTTATTCTAATGAATGA 366 0.4481 MATATYPPLPPFYRLYEDYLQNPKSAPEPPPPIEGTYVCFGGTYTTDDVLPSLEEQGVRQLYPKGSNVGKWDGSCEMLTKMVVCCCGRRCNIEVFGDGCDAIEMLSYCEWNDNRDGSYSNE* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01481 121 Pfam MED7 protein 26 66 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte11g01481 121 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 68 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01481 Pte-Chr11 33232670 33246806 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Pte11g01481 Med7 9.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01481 K15148 - tcc:18599197 128.642