Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01479 ATGGCTACTGCAACGTACCCACCTCTGCCTCCTTTCTATAGACTCTACAAAGATTACTTACAAAACCCTAAATCCGCTCCTGAACCTCCTCCTCCAATTGAAGGCACCTACGTTTGTTTTGGAGGCACCTACACTACTGATGATGTGCTACCAAGCCTAGAAGAGCAGGGAGTGCGCCAGCTGTACCCCAAAGGATCTAATGTGGATTTCAAGAAGGAACTAAGGTCGCTTAACAGAGAATTGCAATTGCACGTCCTAGAACTTGCTGATATTCTCGTTGAGAGGCCATCACAATATGCAAGAAGAGTGGAAGATATATCTGTTATATTCAAGAACTTGCATCACCTTCTAAATTCACTACGACCTCACCAGGCAAGAGCAACACTAATTCACATTCTAGAACTCCAAATACAACGACGGAAACAAGCTATTGAGGATATCAAGAGGAGGAGAGAAGAGGCGCAGATACTACTTCAGGAGTCCCTGGCAACCCTGGATGGACATTCTGGAATTAATTAA 519 0.4432 MATATYPPLPPFYRLYKDYLQNPKSAPEPPPPIEGTYVCFGGTYTTDDVLPSLEEQGVRQLYPKGSNVDFKKELRSLNRELQLHVLELADILVERPSQYARRVEDISVIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAIEDIKRRREEAQILLQESLATLDGHSGIN* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01479 172 Coils Coil 130 164 - -
Pte11g01479 172 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte11g01479 172 SUPERFAMILY Mediator hinge subcomplex-like 67 155 IPR037212 GO:0016592
Pte11g01479 172 Gene3D - 61 158 IPR044888 -
Pte11g01479 172 Pfam MED7 protein 26 155 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01479 Pte-Chr11 33225940 33230622 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Pte11g01479 Med7 1.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01479 K15148 - cave:132192188 307.375