Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01465 ATGAACTACTTGCTTGGTGCTTGCAGGTGGTCTGCAATTGCATCGCACTTGCCAGGACGAACTGACAATGAAATAAAAAATGTGTGGCATACCCACTTGAAGAAGAGGCTCACACAGAACCATCCTAATTCAACAAAGACCGAGAGATACCCCACTAGTACTGCTAATGCTATTACACTATCTGATTGCCGTTCCACTGCCACCATGCAATCTGAGCATAGTAGCACCAGTTTTGCTACATTTCAAGAGTTGGAGAGTTCATCATGCACAAACTCTACTGATTTTTCATCATCATTTACAGATAAAGTCTCCACAAAAAGTATAGAAAGTAACTGGAAGGATATAGTAAATTTGGATAACGTGGAAGACTCTCTATGCATAATACTGCCTGATGAGATTTATGAGAGTTGCTGGTCAGAAGCACCTCCTGCAGTGTGGGATCATCATGAGAGGTCCACCGTTCCATCGTATGATGATGAAAGAATGCAGGTTCAGTCTGCATTTGAGAACAGCCTTTATGGCAAAGAAAATGGCAATGGGATGAGTTTTTGGTATGACCTATTCGTCACAGCAGGAGACTCACTAGATTTACTACAAAATTTTTAA 606 0.4125 MNYLLGACRWSAIASHLPGRTDNEIKNVWHTHLKKRLTQNHPNSTKTERYPTSTANAITLSDCRSTATMQSEHSSTSFATFQELESSSCTNSTDFSSSFTDKVSTKSIESNWKDIVNLDNVEDSLCIILPDEIYESCWSEAPPAVWDHHERSTVPSYDDERMQVQSAFENSLYGKENGNGMSFWYDLFVTAGDSLDLLQNF* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01465 201 Pfam Myb-like DNA-binding domain 5 33 IPR001005 -
Pte11g01465 201 ProSiteProfiles Myb-like domain profile. 1 33 IPR001005 -
Pte11g01465 201 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 139 - -
Pte11g01465 201 CDD SANT 4 33 IPR001005 -
Pte11g01465 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 37 IPR017930 -
Pte11g01465 201 SUPERFAMILY Homeodomain-like 6 40 IPR009057 -
Pte11g01465 201 Gene3D - 2 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01465 Pte-Chr11 33119020 33121210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01465 1 202 MYB Transcription Factor Family AT3G23250 33.333 1.93e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte11g01465 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01465 K09422 - qsa:O6P43_021418 112.464