Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01459 ATGGGACCCACAAAAGCAAGAATCAAATTAAATAATGCCACTGCATTCATCTTGTATGCAAGTTTTCATTTTCAAACCAAATGCCACCACCAGTCCAATTGTACACACATATATATGCCCAAACCATGTGAGGTTCTCCAATCATGTCTGAAGTTAGAAACAGAGCAACTTATTAGTCAGTGCTTCGTACATACTCAAAACTACAGTCCAAATCACTCCTCCTTTTCAGCTCAAATGGACATGATGTTTCACTCCCCGGGTTCTGATTTTTCTTGCAGCTCTTCTTTCAGTTCACTTGATTCTTTTTCATGGGATGGGCTTCACTTCGAGAATGGTTCTCTTCCCTTCAATGAAAATGACTCAGAAGAAATGCTTTTGTATGGGCTCATCTCAAACGCTACACATGCATGTAGCACACCAGCATGTGATAATCATATGAAGGAAGAGGAGGTTAGTTCAACTAAGAAGGGAATACCCTGCAGAAAGGACAAGTCTTACAGAGGTGTCAGGAGAAGGCCATGGGGGAAATTTGCCGCAGAGATAAGGGATTCCACCAGGCATGGTATAAGGGTTTGGTTGGGGACCTTCGATAGTGCAGAAGCAGCGGCTTTGGCTTATGATCAAGCTGCTTTTTCTATGAGGGGTTCGGCTGCTATTCTCAATTTTCCAGTAGAGCGTGTGAGGGAGTCTCTTCAAGAGATGAGTCATGGTTTCGAAGTTGGGGGTTCACCTGTGGTAGCTTTGAAGAGAAAACACTCCATGAGAAGGAAAATCAGCATCAAGAAAAGCAAAGATGGAGATGTAAGAACAGAAAATGGGGTGGTGTTAGAGGATCTTGGTTCAGAATACTTGGAACAGCTATTGAGTAGTAGTGCATCTGAGAACCCCAGAGCTTGGTGA 900 0.4322 MGPTKARIKLNNATAFILYASFHFQTKCHHQSNCTHIYMPKPCEVLQSCLKLETEQLISQCFVHTQNYSPNHSSFSAQMDMMFHSPGSDFSCSSSFSSLDSFSWDGLHFENGSLPFNENDSEEMLLYGLISNATHACSTPACDNHMKEEEVSSTKKGIPCRKDKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVERVRESLQEMSHGFEVGGSPVVALKRKHSMRRKISIKKSKDGDVRTENGVVLEDLGSEYLEQLLSSSASENPRAW* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01459 299 CDD AP2 164 224 IPR001471 GO:0003700|GO:0006355
Pte11g01459 299 SUPERFAMILY DNA-binding domain 165 225 IPR016177 GO:0003677
Pte11g01459 299 Pfam AP2 domain 165 215 IPR001471 GO:0003700|GO:0006355
Pte11g01459 299 SMART rav1_2 165 229 IPR001471 GO:0003700|GO:0006355
Pte11g01459 299 Gene3D AP2/ERF domain 164 225 IPR036955 GO:0003700|GO:0006355
Pte11g01459 299 PANTHER DNA-BINDING DOMAIN 131 293 IPR044808 GO:0003700|GO:0009873
Pte11g01459 299 FunFam Ethylene-responsive transcription factor 2 164 225 - -
Pte11g01459 299 ProSiteProfiles AP2/ERF domain profile. 165 223 IPR001471 GO:0003700|GO:0006355
Pte11g01459 299 PRINTS Ethylene responsive element binding protein signature 166 177 IPR001471 GO:0003700|GO:0006355
Pte11g01459 299 PRINTS Ethylene responsive element binding protein signature 189 205 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01459 Pte-Chr11 33067797 33069912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01459 114 300 AP2-EREBP Transcription Factor Family AT3G23240 64.062 1.05e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte11g01459 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01459 K14516 - qsa:O6P43_021430 254.603