Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01454 ATGAGCTTAGGCAGAAAAATAGACCCAGAACCAGGGAGGTGTAGAAGAACAGATGGCAAGAAATGGAGGTGCACAAAAGAGGCTTACCTAGAATCTAAGTACTGTGAGAGACACATGCACAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACTCCATCAAACGCAAACTCATTCATCACCCAGAATCACTCTCCTGCACTCACCCCGACCGCGCATTTTGTGTCTACTTACTCATCATCATCACTGTCCACCGAGACAGTACACCACCCACAAATTCATCCCTGCTACACAAGTAATAGTCCCCATCCCCACTTTCCTTTGCTTCATCATAACAATAGCAATGCTAACTCATATGGCTTCTCATGTCAAGACAATAATACCACCCCTTGGTTTCTGGATACTGTTGCAGCCTTTCCCGATAGCAGCAGTACATAA 450 0.4489 MSLGRKIDPEPGRCRRTDGKKWRCTKEAYLESKYCERHMHRGKNRSRKPVEVLKTTPSNANSFITQNHSPALTPTAHFVSTYSSSSLSTETVHHPQIHPCYTSNSPHPHFPLLHHNNSNANSYGFSCQDNNTTPWFLDTVAAFPDSSST* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01454 149 PANTHER GROWTH-REGULATING FACTOR 5 3 130 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pte11g01454 149 ProSiteProfiles WRC domain profile. 8 52 IPR014977 -
Pte11g01454 149 Pfam WRC 9 51 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01454 Pte-Chr11 33028186 33028635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01454 1 49 GRF Transcription Factor Family AT2G06200 84.314 2.09e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01454 - - qsu:111985505 164.466