Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01448 ATGAGCTTAGGCAGAAAAATAGACCCAGAACCAGGGAGGTGTAGAAGAACAGATGGCAAGAAATGGAGGTGCTCAAAAGAGGCTTACCCAGAATCTAAGTACTGTGAGAGACACATGCACAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACTCCATCAAACGCAAACTCATTCATCACCCAGAATCACTCTCCTGCACTCACCCCGACCGCGCATTTTGTGTCTACTTACTCATCATCATCATTGTCCACCGAGACAGTACACCACCACCCACAAATTCATCCCTGCTACACAAGTAATAGTCCCCATCCCCACTTTCCTTTGCTTCATCATAACAATAGCAATGCTAACTCATATCAAGACAATAATACCACCCCTTGGTTTCTGGATACTGTTGCAGCCTTTCCCGATAGCAGCAGTACAGAATTCAGGTTTGTCTCTAACAATGGCGTTGTAACATTGCCTTGGTCCTACGTTTGCGGTGTTGTCTATCTTACTTTCTTGTTCATCTTTTTATGA 534 0.4401 MSLGRKIDPEPGRCRRTDGKKWRCSKEAYPESKYCERHMHRGKNRSRKPVEVLKTTPSNANSFITQNHSPALTPTAHFVSTYSSSSLSTETVHHHPQIHPCYTSNSPHPHFPLLHHNNSNANSYQDNNTTPWFLDTVAAFPDSSSTEFRFVSNNGVVTLPWSYVCGVVYLTFLFIFL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01448 177 Pfam WRC 9 51 IPR014977 -
Pte11g01448 177 ProSiteProfiles WRC domain profile. 8 52 IPR014977 -
Pte11g01448 177 PANTHER GROWTH-REGULATING FACTOR 5 3 137 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01448 Pte-Chr11 32996420 32998486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01448 1 49 GRF Transcription Factor Family AT2G06200 88.235 4.83e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01448 - - qsu:111985505 160.614