Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01441 ATGTTGCCACAAGTTCGAGTGAACATGTACAACATCGGGAGCCAAGCTCAATGGGCTCAATGCTATGACTGCTCCAAATGGCGGCGGCTGCCAGTGGATATGCTTCTTCCTCTAAAGTGGACGTGTTATGATGATGCTTGGTATACATGCAGTTCTACTAGTTCAGTACCAGAGGAGTTGACACCCAAGGAATTGGACATTTTCCCAAGAACCACTGGAGATTCTAATTTCGAAAGTACAGATACACCCAAGAACATGAGCTTAGCAAGTGCTGCAGTAATTTTGCCATCCGTAAGCCTCATCCTTTTGCATTTGTTCCTAATAATTTCTAGTCATCATACTTAA 345 0.4348 MLPQVRVNMYNIGSQAQWAQCYDCSKWRRLPVDMLLPLKWTCYDDAWYTCSSTSSVPEELTPKELDIFPRTTGDSNFESTDTPKNMSLASAAVILPSVSLILLHLFLIISSHHT* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01441 114 Gene3D - 9 61 - -
Pte11g01441 114 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 9 73 - -
Pte11g01441 114 Pfam CW-type Zinc Finger 17 59 IPR011124 GO:0008270
Pte11g01441 114 ProSiteProfiles Zinc finger CW-type profile. 12 62 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01441 Pte-Chr11 32944209 32946569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01441 13 94 B3 DNA Binding Superfamily AT2G30470 46.739 5.04e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01441 K09287 - pop:7495326 90.5077