Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01425 ATGTCTAGCTCGTCAGAGTTCTCAAGTCTGACGGAGAAGACGCGGGAGAAGCCCTCTGCTTTCTCCCAGACATGTACGAGGTTGAGTCAATATATCAAAGAGAAAGGCAGCATCGGAGATCTTACTCTTGGGATTTCATGCACCACTGAAACAAACCATTCATCCGATATGCATCAAAAGAGATCAACCGCTATGAATTTGTTTCCAGTGGAGGACAGATTGGATAATACTCTTATCCTAAACAACATTGCCGCCACCGCCAGAGCACAACCACTGAAGAATGTCACATCCTTGAGTTTACTCCCTCAGGAAACTGCTTCCAGTTCCTCTGTTGCAGAGGAAAATCTCTCAAAGCTGGTTCATACTCATTCAAGTGTTGTGAATAAATCTGCTTCTGAAGAGCAAAAGAGAGCACAGATGACAATCTTCTATAGGGGGCAAGTGTTTGTGTTTGATGATTTTCCTGCTGAGAGAGCTGAAGATGTGATGTCATTGGCCAGTAAAAATGGTTCCCAACAACTTGACAGTTTTGCTCCTTCAGTGACTCCGAACTTGCAATCAATTATTTCAGAGATGGTACGAACTGCAGGGAACTCCACTGCTCCATTTTCTTCCAATGTCAACATCAATCCATCAACTAACAACAATTTGATTCAAGAGCCAAGACATCAGTCGAATAGACCTGTTATTTGTGATCTACCTATTGCCAGGAAAGCTTCCCTCCATCGATTCCTGGAGAAGAGAAAAGATAGGTAG 756 0.4325 MSSSSEFSSLTEKTREKPSAFSQTCTRLSQYIKEKGSIGDLTLGISCTTETNHSSDMHQKRSTAMNLFPVEDRLDNTLILNNIAATARAQPLKNVTSLSLLPQETASSSSVAEENLSKLVHTHSSVVNKSASEEQKRAQMTIFYRGQVFVFDDFPAERAEDVMSLASKNGSQQLDSFAPSVTPNLQSIISEMVRTAGNSTAPFSSNVNINPSTNNNLIQEPRHQSNRPVICDLPIARKASLHRFLEKRKDR* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01425 251 SMART tify_2 133 168 IPR010399 -
Pte11g01425 251 MobiDBLite consensus disorder prediction 1 21 - -
Pte11g01425 251 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 251 IPR040390 -
Pte11g01425 251 Pfam tify domain 135 167 IPR010399 -
Pte11g01425 251 ProSiteProfiles Tify domain profile. 133 168 IPR010399 -
Pte11g01425 251 Pfam Jas motif 234 251 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01425 Pte-Chr11 32751887 32754584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01425 17 252 Tify Gene Family AT1G74950 38.983 3.16e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte11g01425 tify 3.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01425 K13464 - qsa:O6P43_002641 198.749