Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01414 ATGTCTCTTGCAAGACACCCAGAGGATAAAGCCAACAATGCCCTAGAACAAAGCCAACAGCAACATGGGGTTGAAGTGGAAGGAGGAACCATTGAAGCTACTTCTTCATGGACGCGGCTAAACACTCACAACCACTCTTCCTCTTTTATTCATCTTCCAAAGAAAAGCAAACTGGAGGAGAGTGATGAAGATCTCTTCACGGTTCCAGACGTGGAGGCATCAAAAGCTATGCACAACTCATCTACGCACTCAGGGAGTGAACGTAAGCATAGTGGTGCAACTGATCTAGTCCCTGGGAGACGCCGTAGGGGAAGAAACCCTGTAGACAAGGAGTACAGACGCCTCAAGAGGTTGTTAAGGAATCGGGTCTCTGCTCAACAAGCCAGAGAGAGAAAGAAGGTCTACGTCAATGATCTTGAATCAAGAGCTAGAGAGTTGCAGGATAGAAATTCCAAGCTAGAAGAGAGAATCTCGACTTTGATCAATGAGAACACTATGCTCCGCAAGGTTCTTTTGAACTTAACACCCAAGGCTGATGAAAGTAATGAGGGAAAGCAGCAGGATCAGTCAAGCAAAAGCTGA 582 0.4622 MSLARHPEDKANNALEQSQQQHGVEVEGGTIEATSSWTRLNTHNHSSSFIHLPKKSKLEESDEDLFTVPDVEASKAMHNSSTHSGSERKHSGATDLVPGRRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRARELQDRNSKLEERISTLINENTMLRKVLLNLTPKADESNEGKQQDQSSKS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01414 193 MobiDBLite consensus disorder prediction 174 193 - -
Pte11g01414 193 Gene3D Single helix bin 132 173 - -
Pte11g01414 193 MobiDBLite consensus disorder prediction 1 61 - -
Pte11g01414 193 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 116 131 IPR004827 GO:0003700|GO:0006355
Pte11g01414 193 MobiDBLite consensus disorder prediction 13 51 - -
Pte11g01414 193 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 111 174 IPR004827 GO:0003700|GO:0006355
Pte11g01414 193 SMART brlzneu 109 173 IPR004827 GO:0003700|GO:0006355
Pte11g01414 193 Coils Coil 129 170 - -
Pte11g01414 193 Pfam bZIP transcription factor 110 169 IPR004827 GO:0003700|GO:0006355
Pte11g01414 193 MobiDBLite consensus disorder prediction 73 112 - -
Pte11g01414 193 CDD bZIP_HY5-like 123 164 - -
Pte11g01414 193 FunFam Transcription factor HY5 132 173 - -
Pte11g01414 193 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 42 190 IPR044280 GO:0000981|GO:0045944
Pte11g01414 193 MobiDBLite consensus disorder prediction 82 112 - -
Pte11g01414 193 SUPERFAMILY Leucine zipper domain 112 171 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01414 Pte-Chr11 32619146 32621444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01414 99 181 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 78.313 1.43e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte11g01414 bZIP_1 1.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01414 K16241 - jre:109005672 202.601