Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01412 ATGGTTTCAAGTGAAGAAACTTTATTCATTCTATCAGGTTTGACCGTAGGTCAAGTGGGTATATGCGAGGTAGTTGTTCTATTTGCACTCTCAAGATGGTTCTTCTGTTGGGTTTTCAAACTACTAAGAAATAGAAGCAACTATGGTATCACTCAAACCAACCATGACACACATGCTGCTGCTGCTACTCCTTCTTCTTCACGTCTCTCTTCGCATATATTAATAGAGAGGGATCTCGTGTTAACAACCTTTGGTGCTATTAAGGAAAGGCTGCCAGAAAGTACTTGTGACACATGTGCTGTGTGTTTGAACCAATTGATGCTGGAAGATGAGGTTAGGGAGCTGAGGAACTGTCGTCATGTGTTTCATAAGGAATGCATAGACAGATGGTTGGATCATGATCAAGATCATCATATTTCAACTTGTCCTCTTTGTAGGGCTCCTCTGTTGAAAGATCCTCTGCCATTAGAGGGTTCTGTGTGTTGTCTGCCTGCTCCTCAGCCTAGCTGGGCTGTGGAGAGACTTATCTATCTCTTTGGGGACGATCTGCCACGGTGCTAA 561 0.4349 MVSSEETLFILSGLTVGQVGICEVVVLFALSRWFFCWVFKLLRNRSNYGITQTNHDTHAAAATPSSSRLSSHILIERDLVLTTFGAIKERLPESTCDTCAVCLNQLMLEDEVRELRNCRHVFHKECIDRWLDHDQDHHISTCPLCRAPLLKDPLPLEGSVCCLPAPQPSWAVERLIYLFGDDLPRC* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01412 186 Pfam Ring finger domain 97 146 IPR001841 -
Pte11g01412 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 150 IPR013083 -
Pte11g01412 186 ProSiteProfiles Zinc finger RING-type profile. 99 146 IPR001841 -
Pte11g01412 186 PANTHER RING ZINC FINGER PROTEIN-RELATED 29 182 - -
Pte11g01412 186 SMART ring_2 99 145 IPR001841 -
Pte11g01412 186 SUPERFAMILY RING/U-box 98 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01412 Pte-Chr11 32606028 32606860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01412 12 183 C3H Transcription Factor Family AT5G20885 41.935 6.34e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01412 K16281 - qsa:O6P43_021965 192.971