Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01406 ATGGCTCTTTCTCTTGCAAAAGAGCTGTCAAGATCACTAGTCGTCACTCTCATTTTGTTCACATTTATTCTGGGTTTCTGTGCACCATTTGATGCTAGCTCTCACTCAGATTCTCTAGACACAGAGTGCTTGAGTGTGAGCTCGTCTGAATTTGTTAGCTCTATTAGAATTATAATCCATGTCTTTCAACAGGTTGGCTCCATTTTGTCCAAGTTTGCTAGCTTTTTCGGTGACTTTCGTGTCGCCATTGCAGTCAGCGACTGCCTTGATTTGCTTGATTTATCTTCTGACGCTCTCAGCTGGACTATGTCAGCAGTCCAAAATCCTAACGGTAAGCACAACAGTACAGGAAATTTGAGCTCAGATTTAAGGACATGGTTGAGCTCAGTAATAATGAGCCCACAGACATGTCTAGAAGGTTTTGAAGGAACAGACGGTATTGTGAAGGAACTTGTATCTGTAGGACTAACCCAAGTAACCTCAATGGTTACTAGCCTTCTCACCAATGTGAACCCAGGCAGCCCTCACTTTGCAAGCGTAGCAAAGAATCAATTTCCTCACTGGGTTAGACCAGAGGACAGGAAGTTACTGCAATCAAATGGGGTTGCAGTAGATGTCATTGTAGCATCAGATGGGACTGGAAATTTCACCACCATCAAGGATGCAGTCTTATCAGCACCAAACTACAGCATGACACGGTATGTGATATACATAAAGAGGGGTTTGTACAAAGAGAATGTAGAGATCAAGAAGAAAAAATGGAACCTTATGATGATTGGAGATGGTATGAATGTTACTATCATTTCAGGCAAAAGGAATTACATGGACGGATGGACCACTTTCCGCACTGCTACTTTTGCTGTTAGTGGAAGAGGGTTCATAGCGAAAGACATAAGCTTTGAGAACACAGCAGGACCAGAGAAACACCAAGCAGTTGCACTGAGAGTTGATTCTGATCTATCAGTCTTCTACAGATGTGGAATACACGGATACCAAGACACCCTTTACACACACACCATGCGACAATTCTTCAGAGAATGCAAAATTACAGGCACAGTTGATTTCATCTTTGGTGATGCTGCAGCTGTGTTCCAAAAATGTCAAATACAAGCCAAAAAAGGATTGCCAGACCAAAAGAACACGATCACAGCTCAAGGTCGCAAGGACCCTAATGAGCCAACAGGCTTCGCCATCCAATTCTGTAATATCACTGCTGATACTGACCTTGTACCCTATGTCAATTCAACACAGACTTACCTTGGTAGGCCATGGAAACTGTATTCAAGAACCATATTCATGCAGAATTACATCAGTAATGTGTTGAGACCAGAAGGGTGGCTTGAGTGGAATGAAACTTTTGCTTTGGATACTTTGTATTATGCAGAGTTGATGAACTATGGCCCAGGAGCTGGAGTGGGTAAAAGAGTCAAATGGCCAGGGTATCATGCACTGAATGCTTCTAGTGAGGCCAATAACTTCACGGTCTCTCAATTTATTGAAGGGAATTTGTGGTTGCCGTCCACCGGTGTAGCCTTCACAGCTGGATTCGGAGGTTGA 1557 0.4316 MALSLAKELSRSLVVTLILFTFILGFCAPFDASSHSDSLDTECLSVSSSEFVSSIRIIIHVFQQVGSILSKFASFFGDFRVAIAVSDCLDLLDLSSDALSWTMSAVQNPNGKHNSTGNLSSDLRTWLSSVIMSPQTCLEGFEGTDGIVKELVSVGLTQVTSMVTSLLTNVNPGSPHFASVAKNQFPHWVRPEDRKLLQSNGVAVDVIVASDGTGNFTTIKDAVLSAPNYSMTRYVIYIKRGLYKENVEIKKKKWNLMMIGDGMNVTIISGKRNYMDGWTTFRTATFAVSGRGFIAKDISFENTAGPEKHQAVALRVDSDLSVFYRCGIHGYQDTLYTHTMRQFFRECKITGTVDFIFGDAAAVFQKCQIQAKKGLPDQKNTITAQGRKDPNEPTGFAIQFCNITADTDLVPYVNSTQTYLGRPWKLYSRTIFMQNYISNVLRPEGWLEWNETFALDTLYYAELMNYGPGAGVGKRVKWPGYHALNASSEANNFTVSQFIEGNLWLPSTGVAFTAGFGG* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01406 518 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 163 IPR035513 -
Pte11g01406 518 Pfam Pectinesterase 205 502 IPR000070 GO:0030599|GO:0042545
Pte11g01406 518 Pfam Plant invertase/pectin methylesterase inhibitor 83 163 IPR006501 GO:0004857
Pte11g01406 518 Gene3D - 200 516 IPR012334 -
Pte11g01406 518 CDD PMEI-like_4 17 168 - -
Pte11g01406 518 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 171 IPR035513 -
Pte11g01406 518 SMART PMEI_2 34 166 IPR006501 GO:0004857
Pte11g01406 518 SUPERFAMILY Pectin lyase-like 202 515 IPR011050 -
Pte11g01406 518 FunFam Pectinesterase 199 516 - -
Pte11g01406 518 PANTHER PECTINESTERASE 51 506 - -
Pte11g01406 518 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01406 Pte-Chr11 32522540 32525205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01406 19 516 Carbohydrate Esterase AT3G43270 61.914 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01406 K01051 - qsa:O6P43_003777 732.25