Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01399 ATGGATGATAATGGAGGCAGCAAGTTGACCGGAATCCGGCAGATCGTAAGGCTGAAGGAAATCCTGCAGAAGTGGCAAACTGTTACCCTTGGCACAAGATCATCAAGCCCTGTCCACTCTCATCATCCAAACCATGGTGGCATATCACCCATAATTCACAAAAGGCTAAGGGATGTAATGTGTGATTCCGATGAGGAAAGCTGCTACAGCCCTTCACCACCACCTGATGTTCCAAAAGGTTATTTGGCGGTTTACGTTGGCCGAGAGCTCCGGAGGTTCATCATTCCGACCGCCTACCTCAGCCACTCACTTTTCAAAGTGTTGCTGGAGAAGACTGAGGAGGAGTATGGGTTTGATCACGGTGGTGCTCTCACAATTCCATGTGAAACTGAGACCTTCAAGTACCTACTAAAATGCATGGAAACTCATCGCTCTAATGATAGCTCTGCTGGACAGTCACCTGAATTTGGGGAATGA 477 0.4801 MDDNGGSKLTGIRQIVRLKEILQKWQTVTLGTRSSSPVHSHHPNHGGISPIIHKRLRDVMCDSDEESCYSPSPPPDVPKGYLAVYVGRELRRFIIPTAYLSHSLFKVLLEKTEEEYGFDHGGALTIPCETETFKYLLKCMETHRSNDSSAGQSPEFGE* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01399 158 Pfam Auxin responsive protein 63 139 IPR003676 GO:0009733
Pte11g01399 158 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 58 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01399 Pte-Chr11 32456994 32459056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01399 1 159 Calmodulin-binding Proteins AT3G43120 69.565 2.83e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01399 K14488 - cit:102619589 233.417