Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01395 ATGGACATGGATATGGCAACTGATGCGACCTTAGAACAAGTGAACCAACCTCATGTCTTTTGTCCTGAAAATGAACAAGGAAATTCAAAGGGACAAGAAGATCCGAAAAAGAGCGTGGAGAAACACACAACCATAAGGACTGTTCAGTTCTACAAACTTTTCTCTTTCGCAGACAGGGTGGATTATCTGTTGATGGTCGTCGGGACAATTGCTGCAGCGGGGAATGGACTCTCTATGCCTATGATGACTGTGATTTTTGGACATCTAGTCAATGCATTTGGAGGAACCATGAATATGAAACAAGTTGTTCATGAAGTTTCCGAAGTGTCTCTTGATTTTGTCTACTTAGCTCTCAGTTCTTTTGCCGCATCCTTTCTTCAGGTGGCTTGTTGGGTCGTAACTGGGGAGAGGCAAGCTGCCAGAATTAGAAGACTCTACCTTAAAACAATTCTGAGGCAAGACATGAGCTTCTTTGATACACAAGCTAACAATGGTGAGATTGTAGGGCAGATGTCAGGTGGCACTGTACTTATTCAAGATGCAATTGGTGAGAAGGTCGGCAAGTTCATACAGTTGCTGTCATCTTTCATCGCAGCTTTGATCATATCTTTTGTCAAGGGATGGCTTCTAACACTAGTCATGCTATCTTGTGTTCCACTTCTTGTCTTTTCTGGTGCTTTGATGAGCTATGTAATAGCAAAGGTGGCAACTCGTGGCCAAGATGCTTATTCTGCAGCAGCTAATGTAGTACAGCAGACAATTGGTTCAATTAGAACCGTTGTATCATTTACGGGAGAGAAACGAGCTATATCTAGATATAACCAGTCATTAACCAAAGCTTACAAGGCCAACGTGCAAGAGGGTCTTACTTCTGGATTAGGTGTCGGTACAGTAATGTTTATAGTGTGCTCAAGTTATTCTTTGGCTATCTGGTATGGAGGGAAGATGGTTGCAAATAAAGGGTACACAGCAGGGGATGTTATCACTGTCAGTTTTGCAATTTTGACTGGCTCCATGTCATTAGGACAGGCATCTCCATGCTTCAGTGCATTTGCTGCTGGACAAGCTGCAGCCTATAAGATGTTTGAAGCAATTTGGCGTAAATCACTTATCGATGTTTATGACACTGAGGGACGGACATTGGATGACATACATGGAGTTATAGAACTAAGGGAGGTGTATTTCAGCTATCCCTCAAGGCCTCATGAACAAATCTTATCTGGGATTTCTCTGTCCATACCTAGTGGCAGTACTGCTGCTTTGGTTGGACAGAGTGGGAGTGGAAAATCAACAGTACTCAGTTTAATTGAGAGGTTTTATGATCCCCAATCTGGTCAAGTTCTCATTGATGGTATAAATCTGAAAGAGTTTCAGGTAAAGTGGATTAGACAAAAAATTGGCCTTGTCAGCCAAGAGCCAGTGTTGTTTACATCTACCATTAAAGAAAATATTGCATATGGGAAAGATAGTGCAACTGATGAAGAAATTCTGATTGCGGCAGAGCTAGCTAATGCTGCTAAGTTTGTTGACAAGCTTCCTCAGGGATTAGATACAATGGTTGGTGAGTGTGGGACTCAGCTCTCTGGAGGACAAAAACAAAGAATTGCTATAGCAAGAGCAATTTTGAGAGATCCTAGGATTCTCCTTTTAGATGAAGCAACAAGTGCTCTTGATGCTGAGTCCGAGAGAGTAGTGCAGGAAGCACTTGATAGAATTAAGATCAACCGGACAACTGTAGTCGTAGCCCATCGTTTAAGAACAATCAGAAATGCTGATGTGATTGCCGTTATTGATCAGGGGAAAATCGTCCAAAAAGGCTCACATGAAGAACTGACTAAGAATTCTGATGGAGCCTACAGTCAACTCATGAGGTTGCAAAAAATCAGCTTGACTGCAAAATATAATGAAGAAAATGATTTTGACAGACAAGAAATTGCAAGAGTTTCAGGACGCCAATCATTCCATTGCTTTAGTGTTTCGAAATCTATCAGTAGGGAATCATCTGGAATTGGAAATAGTACTCATCACTCATTCTCTGCAACTTGTGTTGTGCCAAATCACGTTGACGACCTTGAAGCAGCAGTTGCAGAATCTTCTGGACCACCATCACAAGCACCTCCTGAAGTCTCACTTCGCAGGCTAGCTTCTCTTAACAAAACTGAAATTCCAATACTATTGATGGGAACTCTGGCTGCTGGGGCCAGTGGAACAGTAAAGCCGATTTTCGGGTTGTTGATAGCCAAAATGATAGTTGTCTTTTACGAACCTGCAGATGAACTACTTAAAGGTTCAAGATTTTGGGCACTAATCTTCCTTGCCCTTGGTGTAGCAAGTCTTGTACTGTCTCCATCAAGAACATACTTATTTGCTGTTGCAGGAGGCAAATTGATAAGAAGGATAAGGAGGATGTGTTTTGAGAAAGTAATTTACATGGAAGTAAGTTGGTTTGATGAAACAAATCATTCAAGTGGAGCACTTGGAGCAAGGCTTTCTACAGATGCAGCTTCTCTTAGAGTATTAGTGGGGGATGCACTTGGTTTGCTCGTTCAAAATATTGCTACTGCAATTGCAGGCTTATTCATTGCATTCTCAGCAAATTGGCAGCTTGCATTGATAGTCCTCTTTTTGCTTCCTCTAATCGCAGTGAATGGATATGTTCAATTTGAATCTCTCAAAGGATTCAGTGCGGATGCCAAGAAATTATATGAAGCAGCAAGTCAAGATGCAAATGATGCTGTAAGAAGCATAAGGACAGTGGCTTCTTTCTGTGCTGAAGAGAAGGTGCTTAACTCGTACCGCAAGAAATGCGAAGGCCCCATTAAAGCTGGAATAAAGCAGGGACTAATCAGTGGAGTAGGTTTTGGTCTATCAAATTTGTTTCAGTTTGCTGTATATGCATGCAGCTTTTATGCAGGAGCCAGACTAGTTGAAAAAGGAAAAACAACGATTTCAAATGTTTTTGAAGTCTACTTTGCACTTACTTTGGCAGCAGTAGGAATCTCTCAATCTAGTTCACTAGCAAATGATGTTACTAAGACCAAGAATTGTGCTGCGTCCATATTTTCCATTCTCGACAGAAAATCAAAAATCGACTCCAGTGACGAATCAGGCATGACCCCAGAAAATATTAAAGGAGAAGTTGAGTTTTCTCATGTTACTTTCAAGTACCCCACCAGAACTGATGTTCAAGTATTCAGAGATCTTTCCCTGGCTATTCCGTCTGGAAAGACAGTTGCATTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATATCATTGTTGCAAAGATACTATGACCCTGATTCAGGTGTCATCAGACTTGATGGAGTAGATATTCAGAAGCTGCAATTGAAGTGGTTAAGGCAGCAAATGGGGCTTGTGAGCCAAGAGCCTGTGCTATTCAATGATACCGTTCGTGCCAATATTGCATATGGAAAAGAAGGAAATGCAACAGAAGTTGAAATTTTAGAAGCAGCACAATTGGCAAATGCTCATAAATTCATTAGTTCTTTACACAAGGGGTATGACACAATTGTAGGGGAAAGAGGAGTTCAACTATCTGGTGGACAGAAGCAAAGAGTGGCCATTGCAAGGGCAATAGTGAAGAACCCAAAAATATTACTTCTAGATGAAGCAACAAGTGCCCTTGATGTTGAGTCTGAAAAAGCTGTCCAAGATGCACTTGATAAAGCAATGGTTAACAGAACCACAGTAGTAGTAGCACATAGATTAGTTACAATCAAAGGTGCTGATATCATTGCATTGATTAGCGATGGAGCCATTGCTGAGAAGGGAAACCATGAAAGCTTACTGAGCATCAAGGGTGGCATCTATGGATCTTTGGTAGAGCTGCACAAGTGA 3864 0.4141 MDMDMATDATLEQVNQPHVFCPENEQGNSKGQEDPKKSVEKHTTIRTVQFYKLFSFADRVDYLLMVVGTIAAAGNGLSMPMMTVIFGHLVNAFGGTMNMKQVVHEVSEVSLDFVYLALSSFAASFLQVACWVVTGERQAARIRRLYLKTILRQDMSFFDTQANNGEIVGQMSGGTVLIQDAIGEKVGKFIQLLSSFIAALIISFVKGWLLTLVMLSCVPLLVFSGALMSYVIAKVATRGQDAYSAAANVVQQTIGSIRTVVSFTGEKRAISRYNQSLTKAYKANVQEGLTSGLGVGTVMFIVCSSYSLAIWYGGKMVANKGYTAGDVITVSFAILTGSMSLGQASPCFSAFAAGQAAAYKMFEAIWRKSLIDVYDTEGRTLDDIHGVIELREVYFSYPSRPHEQILSGISLSIPSGSTAALVGQSGSGKSTVLSLIERFYDPQSGQVLIDGINLKEFQVKWIRQKIGLVSQEPVLFTSTIKENIAYGKDSATDEEILIAAELANAAKFVDKLPQGLDTMVGECGTQLSGGQKQRIAIARAILRDPRILLLDEATSALDAESERVVQEALDRIKINRTTVVVAHRLRTIRNADVIAVIDQGKIVQKGSHEELTKNSDGAYSQLMRLQKISLTAKYNEENDFDRQEIARVSGRQSFHCFSVSKSISRESSGIGNSTHHSFSATCVVPNHVDDLEAAVAESSGPPSQAPPEVSLRRLASLNKTEIPILLMGTLAAGASGTVKPIFGLLIAKMIVVFYEPADELLKGSRFWALIFLALGVASLVLSPSRTYLFAVAGGKLIRRIRRMCFEKVIYMEVSWFDETNHSSGALGARLSTDAASLRVLVGDALGLLVQNIATAIAGLFIAFSANWQLALIVLFLLPLIAVNGYVQFESLKGFSADAKKLYEAASQDANDAVRSIRTVASFCAEEKVLNSYRKKCEGPIKAGIKQGLISGVGFGLSNLFQFAVYACSFYAGARLVEKGKTTISNVFEVYFALTLAAVGISQSSSLANDVTKTKNCAASIFSILDRKSKIDSSDESGMTPENIKGEVEFSHVTFKYPTRTDVQVFRDLSLAIPSGKTVALVGESGSGKSTVISLLQRYYDPDSGVIRLDGVDIQKLQLKWLRQQMGLVSQEPVLFNDTVRANIAYGKEGNATEVEILEAAQLANAHKFISSLHKGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDVESEKAVQDALDKAMVNRTTVVVAHRLVTIKGADIIALISDGAIAEKGNHESLLSIKGGIYGSLVELHK* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01395 1287 PANTHER ABC TRANSPORTER B FAMILY 26 627 IPR039421 -
Pte11g01395 1287 FunFam ABC transporter B family member 9 52 384 - -
Pte11g01395 1287 Pfam ABC transporter 406 555 IPR003439 GO:0005524
Pte11g01395 1287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 388 624 IPR003439 GO:0005524
Pte11g01395 1287 SUPERFAMILY ABC transporter transmembrane region 53 351 IPR036640 GO:0005524|GO:0016020
Pte11g01395 1287 SUPERFAMILY ABC transporter transmembrane region 708 1027 IPR036640 GO:0005524|GO:0016020
Pte11g01395 1287 MobiDBLite consensus disorder prediction 14 28 - -
Pte11g01395 1287 FunFam ABC transporter B family member 9 1014 1036 - -
Pte11g01395 1287 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 726 1012 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte11g01395 1287 Pfam ABC transporter 1066 1215 IPR003439 GO:0005524
Pte11g01395 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 626 IPR027417 -
Pte11g01395 1287 CDD ABC_MTABC3_MDL1_MDL2 388 626 - -
Pte11g01395 1287 CDD ABC_6TM_Pgp_ABCB1_D2_like 715 1030 - -
Pte11g01395 1287 ProSitePatterns ABC transporters family signature. 527 541 IPR017871 GO:0005524|GO:0016887
Pte11g01395 1287 Gene3D - 1037 1287 IPR027417 -
Pte11g01395 1287 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 66 353 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte11g01395 1287 CDD ABC_6TM_Pgp_ABCB1_D1_like 65 349 - -
Pte11g01395 1287 FunFam ABC transporter B family member 1 378 627 - -
Pte11g01395 1287 Gene3D ABC transporter type 1, transmembrane domain 112 1021 IPR036640 GO:0005524|GO:0016020
Pte11g01395 1287 Gene3D - 386 639 IPR027417 -
Pte11g01395 1287 FunFam ABC transporter B family member 1 1037 1287 - -
Pte11g01395 1287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1047 1284 IPR003439 GO:0005524
Pte11g01395 1287 MobiDBLite consensus disorder prediction 14 40 - -
Pte11g01395 1287 CDD ABC_MTABC3_MDL1_MDL2 1047 1285 - -
Pte11g01395 1287 SMART AAA_5 415 601 IPR003593 GO:0016887
Pte11g01395 1287 SMART AAA_5 1074 1268 IPR003593 GO:0016887
Pte11g01395 1287 FunFam ABC transporter B family member 1 705 1013 - -
Pte11g01395 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1036 1284 IPR027417 -
Pte11g01395 1287 Pfam ABC transporter transmembrane region 66 339 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte11g01395 1287 Pfam ABC transporter transmembrane region 725 997 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte11g01395 1287 ProSitePatterns ABC transporters family signature. 1187 1201 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01395 Pte-Chr11 32422737 32428136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01395 113 631 Calmodulin-binding Proteins AT2G36910 40.649 3.38e-110 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01395 K05658 - qsa:O6P43_021947 1794.25