Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01386 ATGGTAAAAATAAGCAAGATTGCTTATGGAGGAATTTCCTTCTTCCTTGTGGTTGCCGTAGTTTTTAGCGTTACAGTTAATGCATCCCAACAAGATGACTCTGATATTCAGAAAGTCATCACAAGTACTTCTAATGAGGCTATGAATGCAATTTGTGCCGAGACAGAAAACAAGAGTCCCCATTGTGGTCGGAGCCTTGCCGCGACGGAAAAGAATGACGGTGCCTCAAAGTCAACAGCTGACTACATCAAAGATGCAATTGAAGCAGCCCTGAAAGCAGTTTCATCTGCATTAAATTTATCTGGCGACCTTCACAAAAAGGCTGATAAGTCAAGCCATAAGATGGCCATGGAGGACTGCCAAGACCTTTTACAGTTCGCCGTGGATGAACTGCAGGAATCCTTTTCGTCTGTGGAAAATAATAAAGAGCACTCCATGGATGACAGAGTAGATGATTTGAAAAACTGGTTGAGTGCTGTCATATCCTACCAAGATACGTGCCTTGATGGGGTTCAAGATCCGGACTTGAAGAAAGTAATGTCAAATGGTCTTGTCAATGCCACGGAGTTGACAAGCAGCGCTTTGGCCATCGTTTCTAAGATAACTGGAATACTTAGTGACTATGGTATTTCATTTGATGGTTTCAGTAAAAGAAAGCTTGACGAAACCCAAGACAGCAGTAACGGTCAGTACCCTTCATGGATGTCATCTACGGACAGACAGTTATTAGCAAGCCAAAAACCCGACGCCATTAAGCCTAATGCAGTGGTAGCGAAAGACGGAAGTGGGCAATACAAAACAATCAAAGAAGCACTTGCAGCTTACCCCAAGAAACACAAAGGAAGATATGTAATCTACGTAAAGGCCGGCATATACAAAGAGCAAGTTTTGGTAGACAAGAAGCAGGCGAATGTGTTTATGTATGGAGATGGACCTCAGAAGACAATCGTGACAGGAAGATTGAACTTTAATGAGGGTACCTCGACCTATCGAACTGCTACATTTGCGGCTGTTGGACCTGGTTTCCTCTGCAAATCAATGGGATTCGAGAACACGGCAGGGCCTCAGGGACATCAAGCTGTGGCACTTCGTGTTCAATCGGACATGTCTGCATTTTTCAATTGCAGGATGGACGGGTATCAGGACACATTGTACACACAAACCCATCGCCAATTCTACCGCAACTGCGTCATCTCAGGGACAGTTGATTTCATCTTTGGAGATGCCGCAGTCGTAATCCAAAACTCTGAGATTATTGCAAGGATGCCGATGGAAAACCAAAAGAACCTCATTACAGCTTCCGGGAGAGTTGATCCAAATGAAGATACTGGCATAGTCATCCAAAACTGCCAGATTGTTCCTGAGCAGAAACTCTTCCCTGCAAGATTCAAGATTCCTACCTACTTAGGTCGACCATGGAAGAAATATGCGAGGACCGTGTTCATGGAATCTTCACTGGGGGATCTCATTCACCCAGATGGATGGCTACCGTGGGACGGAAACTTCGCGTTGGATACACTTTACTATGCAGAGTACAACAACGTAGGTCCTGGGGCTTCAACGGATAAGAGGGTAAAGTGGAAGGGATACAAAGTCATCAAGGACAGGAAAGAGGCAGAGAAATTCACAGTAGGACCGTTTCTGAAAGCAAATACATGGCTTCCAGCCACAACCGTGCCATTCTTCGCTGGATTCAAATCCTAA 1704 0.4478 MVKISKIAYGGISFFLVVAVVFSVTVNASQQDDSDIQKVITSTSNEAMNAICAETENKSPHCGRSLAATEKNDGASKSTADYIKDAIEAALKAVSSALNLSGDLHKKADKSSHKMAMEDCQDLLQFAVDELQESFSSVENNKEHSMDDRVDDLKNWLSAVISYQDTCLDGVQDPDLKKVMSNGLVNATELTSSALAIVSKITGILSDYGISFDGFSKRKLDETQDSSNGQYPSWMSSTDRQLLASQKPDAIKPNAVVAKDGSGQYKTIKEALAAYPKKHKGRYVIYVKAGIYKEQVLVDKKQANVFMYGDGPQKTIVTGRLNFNEGTSTYRTATFAAVGPGFLCKSMGFENTAGPQGHQAVALRVQSDMSAFFNCRMDGYQDTLYTQTHRQFYRNCVISGTVDFIFGDAAVVIQNSEIIARMPMENQKNLITASGRVDPNEDTGIVIQNCQIVPEQKLFPARFKIPTYLGRPWKKYARTVFMESSLGDLIHPDGWLPWDGNFALDTLYYAEYNNVGPGASTDKRVKWKGYKVIKDRKEAEKFTVGPFLKANTWLPATTVPFFAGFKS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01386 567 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Pte11g01386 567 Pfam Pectinesterase 254 550 IPR000070 GO:0030599|GO:0042545
Pte11g01386 567 SMART PMEI_2 43 197 IPR006501 GO:0004857
Pte11g01386 567 Pfam Plant invertase/pectin methylesterase inhibitor 48 197 IPR006501 GO:0004857
Pte11g01386 567 FunFam Pectinesterase 44 202 - -
Pte11g01386 567 Gene3D - 248 565 IPR012334 -
Pte11g01386 567 PANTHER PECTINESTERASE 16 557 - -
Pte11g01386 567 FunFam Pectinesterase 248 565 - -
Pte11g01386 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 202 IPR035513 -
Pte11g01386 567 SUPERFAMILY Pectin lyase-like 251 564 IPR011050 -
Pte11g01386 567 CDD PMEI-like_3 50 203 - -
Pte11g01386 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 203 IPR035513 -
Pte11g01386 567 NCBIfam pectinesterase inhibitor domain 13 201 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01386 Pte-Chr11 32366253 32368116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01386 7 566 Carbohydrate Esterase AT5G49180 43.257 1.07e-156 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01386 K01051 - egr:104417569 681.404