Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01363 ATGGGAACAGAGGCGGAAATTATCTGTCAGCCAAGAATTCCGGCGTTGGATGTGAAGTATCATCTGCGTGTTGCAACGGATCATAACGTCAAGATGGATGTTTCATCCACCTCACCTTCAACGCCGATCTTCGGCGAAGTTCGAGTGTCTTCTGAATCGGATTCTACCGAGAATTCATGTTTGGAATCGGTTGTGACTTGCTCGGAGACCATTAAAGATGCTATATTGGAGACTTCTTTGGTTAATTTTGTCCCCAACATTCGCTCAGGGAGCTATGCTGACATTGGTCCTCGGGGATCCATGGAGGATGAACACATTTGTATCGACGATCTTGCTGCTCATCTTGGGTCTCTGTACAAGTGTCCCTCTCCTAGTGGGTTCTATGCTGTTTTTGATGGCCATGGAGGACCTGAAGCAGCTGCGTTTATTAAAAGGAATGCTATGAAACTGTTCTTTGATGATGCCGATCTCCCGCAAACATACGATTCTGATATTGGTTTCTTGAAAGAGTTGGAGAACACTCACAGAAGAGCATTTTTGCTGGCAGACCTTGCCCTTGCCAGTGAGCAAAGTGTGAGCAGTTCCTGCGGGACAACTGCTCTAACTGCACTTGTACTTGGAAGGCATTTGCTAGTTGCAAATGCTGGTGACTGTAGAGCTGTTCTCTGCCGGAGGGGAATGGCAGTGGAGATGTCTCAAGATCATCGACCTACCTACTTGCCAGAAAGGAGGAGGGTGGAAGACTTGGGAGGTTTTGTTGATGATGGCTATTTGAATGGTTATCTTTCAGTTACTCGAGCTCTTGGAGACTGGGACTTGAAATTCCCCCATGGTTCTACATCTCCTCTAATTGCTGAGCCGGATGTGCAGCAGGTGATATTGACCGAAGACGATGAATTCCTGATAATAGGTTGTGATGGGATTTGGGATGTAATGTCGAGCCAACATGCAGTCAGTCTAGTCCGTCGAGGATTGAGAAGACATGATAATCCCCAGCAATGTGCCAGAGAACTTGTAATGGAAGCATTGCGTCTAAATACTTCTGATAATCTCACTGTGGTTGTCGTAAGTTTGTCTTCTCCTGATCGAATTGTGGAGTCATGTCCACCCCACAGGCGGAGGTTGAGAACTTGTAGCTTGTCGGAGGAGGCTCGTGGCAGGTTGAGGAGTTTGCTGGAGGGAAATTGA 1188 0.4705 MGTEAEIICQPRIPALDVKYHLRVATDHNVKMDVSSTSPSTPIFGEVRVSSESDSTENSCLESVVTCSETIKDAILETSLVNFVPNIRSGSYADIGPRGSMEDEHICIDDLAAHLGSLYKCPSPSGFYAVFDGHGGPEAAAFIKRNAMKLFFDDADLPQTYDSDIGFLKELENTHRRAFLLADLALASEQSVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRRGMAVEMSQDHRPTYLPERRRVEDLGGFVDDGYLNGYLSVTRALGDWDLKFPHGSTSPLIAEPDVQQVILTEDDEFLIIGCDGIWDVMSSQHAVSLVRRGLRRHDNPQQCARELVMEALRLNTSDNLTVVVVSLSSPDRIVESCPPHRRRLRTCSLSEEARGRLRSLLEGN* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01363 395 PANTHER PROTEIN PHOSPHATASE 2C 66 357 IPR015655 GO:0004722|GO:0006470
Pte11g01363 395 Pfam Protein phosphatase 2C 98 350 IPR001932 -
Pte11g01363 395 SUPERFAMILY PP2C-like 80 360 IPR036457 -
Pte11g01363 395 SMART PP2C_SIG_2 103 358 IPR001932 -
Pte11g01363 395 Gene3D - 72 363 IPR036457 -
Pte11g01363 395 SMART PP2C_4 78 356 IPR001932 -
Pte11g01363 395 ProSitePatterns PPM-type phosphatase domain signature. 127 135 IPR000222 GO:0043169
Pte11g01363 395 FunFam Probable protein phosphatase 2C 22 71 361 - -
Pte11g01363 395 CDD PP2Cc 87 358 IPR001932 -
Pte11g01363 395 ProSiteProfiles PPM-type phosphatase domain profile. 88 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01363 Pte-Chr11 31968201 31970447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01363 7 396 PP2C-type Phosphatase Gene Family AT1G48040 58.250 1.06e-151 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pte11g01363 PP2C 1.4e-65 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01363 K14803 - qsa:O6P43_021908 628.246