Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01347 ATGCTTCAGGCATTGATGAATCTGTTCTCACTGTGCTGGAAGCCATTTGGGCGCGGTGCTGAGAAATTAGATTCATTTGGTACAGTCGGAGGTGGTTCCAGTGGCAGTGGAGTTGGAAGAGAAGGTAGAGATGGATTGCTTTGGTTCCGTGATATTGGCAAGTATGGCTCCGGCGATTTTTCCATGGCAATTGTCCAAGGGAATCAAGTACTCGAAGACCAAAGCCAGATCGAATCTGGTCCTCTCGGTACATTCGTTGGTGTCTATGATGGTCATGGAGGCCCCGATGCTGCTCGATATGTTTGCGACAACTTGTTCAGGCATTTTCAAGCAATATCAGCTGAGGCACGGGGAGTTGTAACAACAGATACCATACAAAGAGCATTTTACCAAACTGAAGAAGGGTTTAAGGCACTTGTGCAAGAATTATGGAGTGCTCGACCTAGTATTGCAACTGTTGGATCATGCTGTTTAGTTGGGATAATATTTCAACAGACCCTCTTTGTGGCAAACCTTGGGGATTCACGTGCTGTGTTGGGTAAGAAAGTTGGTAGCACGGGTGAGATCGCTGCCATACAACTTTCAACTGAGCACAATGCAAATCTTGAATCTGTCAGGCAAGAGCTTAAGGAGTTACATCCAAATGATCCACAAATTGTAGTCCTCAAGCATGGAGTTTGGAGAGTGAAAGGAATTATTCAGGTATCTAGATCTATTGGTGACATATATATGAAGGATGTGGAGTACAACAGGGAACCAATTCAGGCGAAATTCAGACTTTCTGAACCAATGAACATGCCTATCATGTCTGCTAATCCAACTATTCTTTCTCATACTCTCCATCCAAATGATTCATTCCTTATCTTTGCATCTGATGGACTGTGGGAGCACTTGAGTAATGAAAAGGCTGTGGAAATTGTCCACAACCATCCTCGTGCAGGTAGTGCCAAGAGACTTGTGAAAGCTGCTCTACATGAAGCAGCAAGAAAAAGGGAAATGCGATATTCCGATCTGCATAAAATAGACAAGAAGGTTCGACGTCATTTTCACGATGACATAACTGTCATTGTTCTGTTCCTGAACCATGACCTCATTTCTAGAGGCTGTGTTCAAGATCCTCCTATCTCAATTCGCAGTGCCCTTGATCACTGA 1152 0.4401 MLQALMNLFSLCWKPFGRGAEKLDSFGTVGGGSSGSGVGREGRDGLLWFRDIGKYGSGDFSMAIVQGNQVLEDQSQIESGPLGTFVGVYDGHGGPDAARYVCDNLFRHFQAISAEARGVVTTDTIQRAFYQTEEGFKALVQELWSARPSIATVGSCCLVGIIFQQTLFVANLGDSRAVLGKKVGSTGEIAAIQLSTEHNANLESVRQELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDIYMKDVEYNREPIQAKFRLSEPMNMPIMSANPTILSHTLHPNDSFLIFASDGLWEHLSNEKAVEIVHNHPRAGSAKRLVKAALHEAARKREMRYSDLHKIDKKVRRHFHDDITVIVLFLNHDLISRGCVQDPPISIRSALDH* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01347 383 Gene3D - 52 368 IPR036457 -
Pte11g01347 383 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Pte11g01347 383 SMART PP2C_4 46 358 IPR001932 -
Pte11g01347 383 ProSiteProfiles PPM-type phosphatase domain profile. 59 360 IPR001932 -
Pte11g01347 383 Pfam Protein phosphatase 2C 83 330 IPR001932 -
Pte11g01347 383 PANTHER PROTEIN PHOSPHATASE 57 358 IPR015655 GO:0004722|GO:0006470
Pte11g01347 383 SUPERFAMILY PP2C-like 69 361 IPR036457 -
Pte11g01347 383 CDD PP2Cc 60 360 IPR001932 -
Pte11g01347 383 FunFam Probable protein phosphatase 2C 42 50 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01347 Pte-Chr11 31799402 31802936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01347 1 313 PP2C-type Phosphatase Gene Family AT3G17090 72.204 4.76e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01347 K01102 - qsa:O6P43_003685 662.529