Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01343 ATGGAAGCAAAATCTGTCATTGACTCTCCCTTGTTGACAAAAAAGATCGGTACCAATCGCACAAGTAAGGTCGATATCAATGGCAATAGTGAATTTCGATCGATTCAAGCTGCAGTAGATTCTGTTCCTGAAGGAAATTCTCAATGGGTTATCATCCATGTCAGGAAAGGAACTTATAGGGAAAAGGTACATATACCAAAGAGCAAACCCTACATATATAATCTTGAGAGGAAATGGAGAGGAAGAACAGCCATTGTCTGGTCTGAAAGCTCCTCTGACAACATAGAATCCATTAAATTCAAAGCTGAAGGTCGTAACTTCATTGCATTTGGAGTTAGCTTCAAGGGAAGGCATTACTATGATCATTGCTACATACAAGGCTCAGTGGATTTCATATTTGGACGTGGTAGATCTGTATTTCAGTCTTGTGAGATATTTGTCATCGGTGATAAAAGACTGAAAATTCCTGGATCAATTACAGCACACAACAGAGAAAGTGCAGAGGAAGATAGTGGCTTCGTCTTTATCAAAGGGAAGGTCTATGGCGTTGGTGATGAGGACTAA 564 0.3989 MEAKSVIDSPLLTKKIGTNRTSKVDINGNSEFRSIQAAVDSVPEGNSQWVIIHVRKGTYREKVHIPKSKPYIYNLERKWRGRTAIVWSESSSDNIESIKFKAEGRNFIAFGVSFKGRHYYDHCYIQGSVDFIFGRGRSVFQSCEIFVIGDKRLKIPGSITAHNRESAEEDSGFVFIKGKVYGVGDED* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01343 187 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 18 115 - -
Pte11g01343 187 Gene3D - 17 111 IPR012334 -
Pte11g01343 187 Pfam Pectinesterase 115 182 IPR000070 GO:0030599|GO:0042545
Pte11g01343 187 SUPERFAMILY Pectin lyase-like 19 182 IPR011050 -
Pte11g01343 187 ProSitePatterns Pectinesterase signature 2. 125 134 IPR033131 -
Pte11g01343 187 Gene3D - 112 187 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01343 Pte-Chr11 31774666 31775775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01343 24 184 Carbohydrate Esterase AT5G47500 33.803 1.61e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01343 - - csv:101215809 277.715