Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01342 ATGGGAACCCCACCAGCAGAAGAGCTTCTTAAGAAGATCCAAGAGCTTGAAGCAGGTCACGCCCACCTCAAGCATGAGATGGCAAAGCTCAAGTTTACAGGGTCTGCTGATGTCAGACCTGAACACTTTCATCGTCCAAGGTCTCACTCTATATCGCCGCAGAGGCCCGGTAGGAGGAGAGGTTTTGGTGTTGGAATTGATGGAATGAGCGGTTGGAAAAGCGGTTCAGCTTCTTTTTCTCATTCCTCCCCTCTGCAGAGGGAGAGTAGCAGTCGTGATCCCCCAAATGGTGGTAGTGTCGACTCTGTCAGTGGTGGCAGCAGCAGGGGTCCTGTTGGACCTTCTGCTGTTAAGTTTAGTGATAAGCAGTATCTGAATATTTTACAGTCACTGGGGCAGTCCGTTCATATACTTGATATCAATTCTCGTATCATATACTGGAACTGGACTGCTGAGAGTTTATATGGTTATTCAGCGGAAGAAGCCCTTGGTCAGGATGGCATTGAGCTTCTGACAGACCCCAGGGACTGCGCTGTGGCTAATGACATTGTACAGCGCGTTACCAATGGAGAGAAGTGGACTGGCCAGTTTCCTATAAAGACTAAGAAGGGGGAGAGGTTTATGGTTATGTGTACTAACACACCATTCTATGATGTTGATGAAAAATTAGAAGGGTTTATTTGCGTATCCAACGATTCTCGTGCCTTTAAAGAAATAAAGGTTCCTTTATTTGGTGAAAAACAGTCAGAAACAGATTGGAGCTCCTGTAGGCTTAGAAATACTGTTACAACAAAACTTGATCTCTATTCACGGCAGCCTCTGCAGACTGCAATTGCTTCTAAGATTTCCAATTTGGCATCTACAGTGAGCAACAAAGTGAAGTCAAGAATCCGTACTGATGAGGACAAAGTGGACCGGGATAGTGGGATTGGAGATAGTTATCACTCTGATCATGTTCTTTCAGATTATGTTCTCACTGATCATAGGGAGGATGCCATTGCAAGTGGAGCTTGCACTCCCAGAGAGGACGTTCAGCAATCTCCTTTTGGCGTATTTTCTCATGTCGAAGACAGATACCCTCAAAGATCTTCCAGAGACTACAGTGATGAATATGAAGGAAGACCTCCTATCCACAAGAGCATAACTTCAAAAGCAGAGGCACTGCTGGGTAAGAAGGTGATGTCATGGCCTTGGAAAGGAATTGAACGAGATGATTCAGAGGGAAGGACTGCTGAAACGAGATGGCCCTTTATGCATAATGATCAGGAAAATTCCTCTTTACTGAAACCTGAAAGCCAAGCAAGTGAGAATAATATGCCCGTTAATAATGAGGCTTCAGGATCTTGGTCCTCTTTTAATGTTAACAGCACAAGCAGTTTCAGCAGCAGCTGTGGCAGTACCAATAGCAGTACAGTTAATAAGGTAGACATGGATACTGACTGCTTAGATTGTGAAGTTTTGTGGGAGGACTTGACAACTGGAGAACAAATTGGTCAAGGTTCCTGTGGAACAGTTTATCATGCTCTGTGGGGTGGATCAGATGTTGCTGTCAAGGTTTTCTCCAAGCAAGAATACTCTGATGATGTGATAATTGCATTTCGACAAGAGGTCTCACTGATGAAAAGACTTAGACATCCGAATGTTCTGCTTTTTATGGGAGCAGTGACTTCCCCTCAGCGCCTGTGCATTGTTACTGAATTTCTCCCACGTGGAAGTTTATTTCTCTTACTTCAACGACGCAAGTGTAAACTTGATTGGAGACGACGGACTCATATGGCTTTGGATATTGCACGTGGGATGAATTATCTTCATCATTGCAACCCTCCCGTCATCCACCGAGACTTGAAATCTTCAAATCTTCTGGTTGACAAAAATTGGACTGTGAAGGTTGGTGACTTTGGTCTCTCACGTCTGAAGCATGAAACATATCTCACCACAAAGACTGGGAAGGGCACGCCTCAATGGATGGCACCAGAGGTCCTTCGTAATGAACCCTCGGATGAGAAGTCTGATGTTTACAGTTTCGGAGTAGTTATGTGGGAGCTTGCAACAGAAAAGATCCCTTGGGACAATATGAACTTAATGCAGGTGATTGGAGCTGTTGGCTTCATGGACCAACGTCTAGATATACCGAAAGATGTGGATCCACAGTGGGCTGCAATAATTGAGAGCTGCTGGCACAGTGATCCGGCTTGCCGGCCAATTTTCCAAGAACTAATGGATAGACTGAGAGAGCTACAAAAACAGTACGCAATACAGTTACAGGCATCTCGAGTGGCATCAGGGGAAGCTGTTCAGAAGGAATCATAG 2310 0.4498 MGTPPAEELLKKIQELEAGHAHLKHEMAKLKFTGSADVRPEHFHRPRSHSISPQRPGRRRGFGVGIDGMSGWKSGSASFSHSSPLQRESSSRDPPNGGSVDSVSGGSSRGPVGPSAVKFSDKQYLNILQSLGQSVHILDINSRIIYWNWTAESLYGYSAEEALGQDGIELLTDPRDCAVANDIVQRVTNGEKWTGQFPIKTKKGERFMVMCTNTPFYDVDEKLEGFICVSNDSRAFKEIKVPLFGEKQSETDWSSCRLRNTVTTKLDLYSRQPLQTAIASKISNLASTVSNKVKSRIRTDEDKVDRDSGIGDSYHSDHVLSDYVLTDHREDAIASGACTPREDVQQSPFGVFSHVEDRYPQRSSRDYSDEYEGRPPIHKSITSKAEALLGKKVMSWPWKGIERDDSEGRTAETRWPFMHNDQENSSLLKPESQASENNMPVNNEASGSWSSFNVNSTSSFSSSCGSTNSSTVNKVDMDTDCLDCEVLWEDLTTGEQIGQGSCGTVYHALWGGSDVAVKVFSKQEYSDDVIIAFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFLLLQRRKCKLDWRRRTHMALDIARGMNYLHHCNPPVIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVVMWELATEKIPWDNMNLMQVIGAVGFMDQRLDIPKDVDPQWAAIIESCWHSDPACRPIFQELMDRLRELQKQYAIQLQASRVASGEAVQKES* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01342 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Pte11g01342 769 SMART pas_2 122 189 IPR000014 -
Pte11g01342 769 Pfam PAS fold 123 232 IPR013767 GO:0006355
Pte11g01342 769 NCBIfam PAS domain S-box protein 120 232 IPR000014 -
Pte11g01342 769 MobiDBLite consensus disorder prediction 404 446 - -
Pte11g01342 769 MobiDBLite consensus disorder prediction 32 115 - -
Pte11g01342 769 MobiDBLite consensus disorder prediction 73 109 - -
Pte11g01342 769 SMART serkin_6 491 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01342 769 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 182 748 - -
Pte11g01342 769 MobiDBLite consensus disorder prediction 32 48 - -
Pte11g01342 769 Coils Coil 6 26 - -
Pte11g01342 769 CDD STKc_MAP3K-like 497 743 - -
Pte11g01342 769 Pfam Protein tyrosine and serine/threonine kinase 491 743 IPR001245 GO:0004672|GO:0006468
Pte11g01342 769 ProSiteProfiles PAS repeat profile. 120 191 IPR000014 -
Pte11g01342 769 FunFam PAS domain-containing protein tyrosine kinase 484 568 - -
Pte11g01342 769 PRINTS Tyrosine kinase catalytic domain signature 714 736 IPR001245 GO:0004672|GO:0006468
Pte11g01342 769 PRINTS Tyrosine kinase catalytic domain signature 604 622 IPR001245 GO:0004672|GO:0006468
Pte11g01342 769 PRINTS Tyrosine kinase catalytic domain signature 651 661 IPR001245 GO:0004672|GO:0006468
Pte11g01342 769 PRINTS Tyrosine kinase catalytic domain signature 565 578 IPR001245 GO:0004672|GO:0006468
Pte11g01342 769 PRINTS Tyrosine kinase catalytic domain signature 670 692 IPR001245 GO:0004672|GO:0006468
Pte11g01342 769 SUPERFAMILY Protein kinase-like (PK-like) 470 742 IPR011009 -
Pte11g01342 769 ProSiteProfiles Protein kinase domain profile. 491 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01342 769 Gene3D Phosphorylase Kinase; domain 1 484 568 - -
Pte11g01342 769 MobiDBLite consensus disorder prediction 417 446 - -
Pte11g01342 769 SUPERFAMILY PYP-like sensor domain (PAS domain) 126 229 IPR035965 -
Pte11g01342 769 Coils Coil 736 756 - -
Pte11g01342 769 CDD PAS 131 232 IPR000014 -
Pte11g01342 769 Gene3D Transferase(Phosphotransferase) domain 1 569 769 - -
Pte11g01342 769 FunFam PAS domain-containing protein tyrosine kinase family protein 569 760 - -
Pte11g01342 769 Gene3D PAS domain 133 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01342 Pte-Chr11 31753863 31760654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01342 1 760 MAP Kinase Kinase Kinase AT3G06620 58.876 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pte11g01342 PK_Tyr_Ser-Thr 1.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01342 - - qsa:O6P43_021865 1088.17