Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01334 ATGGGTTGCTCTGTAAATGGGTCTGCAACAACTATCACGTCGTGCAACAGAGGTGAATGCGACTGGGAGAAGATGAATGATGGCGTCGTACTTCATGTGCCTCGGTTTGTTGAGCTCTGTAACACAACCATGGAGAGAGTTGATGCAGCCGTACTCGGGAGAAATTTTGCTCAAAACTTGCAGCTGTTTGTCGTTGAGATTTTACTCATGGCCAAGTTATCACAGAAAAACAACACAAGCAGTACTAGCACCACGACTACCACTGTCACCAAAGTGAAAAGAACCAGGAGAAGTGTCCCAAGGGACTATCCTCCTCAGCGCAGTTCAATATACCGGGGAGTCACAAGGCATCGGTGGACCGGTAGATATGAAGCTCATTTGTGGGACAAGAATTGCTGGAATGAGTCACAGAACAAGAAAGGCAGACAAGACATGATCCTTTGGTACATATATATATATCCAGGTGCTTACGATGATGAAGAAGCCGCTGCACATACTTATGATCTAGCTGCATTGAAATACTGGGGTGAAGATACAATTCTTAACTTTCCGGTGTCCACTTATGAGAATGAGCTCAAGGGAATGGAAGGTCTATCAAGGGAAGAGTACATTGGATCATTAAGAAGGAAAAGTAGTGGTTTCTCACGAGGAGTTTCAAAATACCGAGGCGTTGCCAGACATCATCACAATGGAAGATGGGAAGCCAGAATTGGCAGAGTTTTTGGCAACAAATATCTTTACCTTGGGACATACGCTACTCAAGAAGAAGCTGCCACAGCATATGATTTGGCGGCTATTGAATACCGTGGCCTGAACGCCGTCACTAACTTTGACCTTAGCAGATATATCAAATGGCTGAAACCTAACAACAACATGGCTGACGGTAACGATGGTAGCTTGATTAACAGTAACCCTACTACACAGCTTAACCTAAATAATTACAGTAACCCTAGTTTAGGTCCAAGCACTAATGATCAGGAACAAGGTGTTGGATTGCACTTTTTAATCAACCAGCCATCTGCATTGATCAACCATGGAGATCAGTCGATGGTGGCTTCACAACCAAGGTCAACAACAACAACTGCCATGTCAGCTCTGGGGCTTCTACTTCAGTCATCGAAGTTTAAGGAGATGATGGAGATGACATCTGCTGTGGATCAATCTGTATCATCAACCCAACCAGATCATCATCAAGCAGCCTTACCACAGTGTTCATTCCCTAAGGAAATACAGACCTACTTTGGCAGTGAGAACCCCAGCAGTAGTTACAATGAGGGAGGTGAATTTCTCTTTGGCAATCTCAATTCCTTTAATCCCACCATGTTTCCATGCGACTTTGAAGCATGA 1347 0.4425 MGCSVNGSATTITSCNRGECDWEKMNDGVVLHVPRFVELCNTTMERVDAAVLGRNFAQNLQLFVVEILLMAKLSQKNNTSSTSTTTTTVTKVKRTRRSVPRDYPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQDMILWYIYIYPGAYDDEEAAAHTYDLAALKYWGEDTILNFPVSTYENELKGMEGLSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDLAAIEYRGLNAVTNFDLSRYIKWLKPNNNMADGNDGSLINSNPTTQLNLNNYSNPSLGPSTNDQEQGVGLHFLINQPSALINHGDQSMVASQPRSTTTTAMSALGLLLQSSKFKEMMEMTSAVDQSVSSTQPDHHQAALPQCSFPKEIQTYFGSENPSSSYNEGGEFLFGNLNSFNPTMFPCDFEA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01334 448 SUPERFAMILY DNA-binding domain 219 280 IPR016177 GO:0003677
Pte11g01334 448 FunFam AP2-like ethylene-responsive transcription factor 219 280 - -
Pte11g01334 448 CDD AP2 109 186 IPR001471 GO:0003700|GO:0006355
Pte11g01334 448 SMART rav1_2 110 190 IPR001471 GO:0003700|GO:0006355
Pte11g01334 448 SMART rav1_2 220 284 IPR001471 GO:0003700|GO:0006355
Pte11g01334 448 MobiDBLite consensus disorder prediction 78 105 - -
Pte11g01334 448 ProSiteProfiles AP2/ERF domain profile. 220 278 IPR001471 GO:0003700|GO:0006355
Pte11g01334 448 ProSiteProfiles AP2/ERF domain profile. 110 184 IPR001471 GO:0003700|GO:0006355
Pte11g01334 448 Pfam AP2 domain 219 270 IPR001471 GO:0003700|GO:0006355
Pte11g01334 448 Pfam AP2 domain 110 177 IPR001471 GO:0003700|GO:0006355
Pte11g01334 448 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 79 356 - -
Pte11g01334 448 SUPERFAMILY DNA-binding domain 109 186 IPR016177 GO:0003677
Pte11g01334 448 CDD AP2 219 280 IPR001471 GO:0003700|GO:0006355
Pte11g01334 448 MobiDBLite consensus disorder prediction 78 93 - -
Pte11g01334 448 Gene3D AP2/ERF domain 219 280 IPR036955 GO:0003700|GO:0006355
Pte11g01334 448 Gene3D AP2/ERF domain 110 186 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01334 Pte-Chr11 31681538 31685144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01334 198 292 AP2-EREBP Transcription Factor Family AT5G57390 35.922 2.41e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte11g01334 AP2 2.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01334 K09285 - qsa:O6P43_022231 493.041