Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01318 ATGCAGCAAGGTGATCAAACGGTGATTAGCTTGAGACCTGGTGGCGGTCGCGGTGGCGGAGGCAGGTTATTTAGTTCCTCATCCTCGTCAGCTTCCCCTGCTTTCCCTGCTTTTGGCTCCTTCTCATCTGATCCATCTGTCTTTCGATCATATGGTGGTGCTTCATCTACCTTTTTTGCTAAGACTGGTGACTCAGGTTTAGATGGTCGTGAATGTGTGCACTACACCCGAGATCAACTGTTAAAGCTTAGAGAGGCCATTGTAGTCCCTGATGATATTCTGAAAATCAAAATGGAAATTGAAGCTGAACTTTTTGGAGAAGAGAAAATCTGGACTCGTGTGGAAAACAATCCTCCAAATCAAATTCCAAATCGTTATTCTGAGCATGATGATCGGGACTGGCGTGGCCGATCTGCACAAAATCCTTCCTCTGGAGAAGAGAGATCTTGGGAAACTCTGAGAGAGAACAAAGAGGTTGCAGGTCGATACGAATCAAGGCTGCAAGATAACAATCAATTGAATTCTCAATTTGCAAGGACACAGGTTTCTTCAAACCAAAGGGGAGGTCCTGCTCCTGCTCTAGTGAAGGCTGATGTTCCATGGTCAGCTAGAAGGGGTACTCTCTCTGAAAAGGACCGTGTTCTAAAGACTGTTAAGGGGATATTGAATAAGTTAACCCCGGAGAAGTTTGATCTACTTAAAGGTCAATTGATTGACTCGGGGATCACTTCAGCTGATATCTTGAAGGGTGTCATTTCCCTGATATTTGATAAAGCTGTGCTGGAGCCCACATTTTGTCCCATGTATGCTGAATTGTGTTCTGATCTTAATGAGAAGCTTCCTCCTTTCCCGTCTGATGAACCTGGTGGGAAAGAAATTACTTTCAAGAGAGCCCTATTAAATAAATGTCAAGAGGCTTTTGAAGGTGCTGAAAAATTGAGAGAAGAACTGAGGCAGATGAGTGCCCCTGCTCAAGAGATGGAGCGTAGGGATAAAGAAAGGCTTTTGAAGCTCCGCACTCTAGGAAACATTCGTTTAATTGGTGAGCTATTGAAGCAAAAGATGGTTCCTGAAAAAATAATCCATCACATTGTGCAGGAGCTTCTAGGTCATCAAGATAGCAAGGTCTGTCCTGCTGAGGAGAATGTTGAAGCGATATGTCAGTTTTTCAACACCATTGGTAAGCAGCTGGATGAAAGCCCTAAGTCACGTCGGATCAATGATATGTACTTTAGCCGTCTGAAGGAATTAAGTTCACACCCCCAGCTTGTCCCACGTTCGAGGTTTATGCTTCGTGATGTTTTAGATCTGCGTTCTAACAACTGGGTTCCAAGGCGTGAAGAGGTGAAAGCAAAAACTATCAATGAAATTCATTCTGAGGCTGAAAAGAACCTTGGCTTGCGACCTGGAGCCACTGCAAGCATCAGAAACAATCGTGGTGTAATCTCTGGAGGACAAGGAAACACTGGACCAGGGGGATTCCCCATTGCACGACCTGGGACTGGTGGTTTGATGCCTGGTATGCCTGGAACCAGGAAGATGCCTGGGATGCCTGGCATGGATAATGACAACTGGGAGATGCCTAGGACCCGGTCCATGTCAAGAGGTGATAATCCGAGTATCCATGGTGCAGGGCGTGGGCAGTCACCATTAATTGCTAGGTCCCCCACAATGAATCCAAAGCTGTTACCTCAAGGTAGTGGTGGCTTTATTAGTGGAAAGAGTAGTGCCTTGTTGCAAGGAAGTGGTATGCCTTCTGTTCGTCCAAGCACTGGTGGTTTTGTTAGTGAGGCTGCACCTCAATATTCTGTTCCCGCCAAGCCTTCTGCTCCTCCAGTGTCCATCGCTCCAGCTCCTGCTGTGAAGTCACTGGCTTCAGTACCAAGGTTGAACCCTGAAGATCTTCGCAGGAAGACTGTCTCCCTACTTGAAGAGTACTTCAGCATCCGGCTATTAGATGAGGCGTTACAGTGCCTTGAGGAACTGAACTCCCCTGCCTACCATCCAGAGTTTGTGAAGGAATCTATTTCTCTTGCACTTGAAAGAAGTCCACCATGTGTGGAACCTGTTGCTAATCTTCTGGAATATCTTTTCATAAAGAAGATGCTTACAGCCAGTGACATAGGGACTGGATGTTTGCGTTATGGCTCAATGCTAGATGATATTGCAATTGATTTACCAAAAGCTCCAAATAATTTTGGTGAGATTGTCGGGAGATTAATCCTGGCTGGGGGAATGGATTTCAAGGTGGTGAAGGAGATCCTTGCAAATTTAGAAGATGACATGTTGCGTAAAGCAATATTTAACGCAACAATCCGGGTCATTAGTTCAGCATCTGGTCATGGTATATTGGATTCACAAGCATCTGATGTTGAAGCCTGTCAAAGCTTGCTAGAGTAA 2400 0.4546 MQQGDQTVISLRPGGGRGGGGRLFSSSSSSASPAFPAFGSFSSDPSVFRSYGGASSTFFAKTGDSGLDGRECVHYTRDQLLKLREAIVVPDDILKIKMEIEAELFGEEKIWTRVENNPPNQIPNRYSEHDDRDWRGRSAQNPSSGEERSWETLRENKEVAGRYESRLQDNNQLNSQFARTQVSSNQRGGPAPALVKADVPWSARRGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGKEITFKRALLNKCQEAFEGAEKLREELRQMSAPAQEMERRDKERLLKLRTLGNIRLIGELLKQKMVPEKIIHHIVQELLGHQDSKVCPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSSHPQLVPRSRFMLRDVLDLRSNNWVPRREEVKAKTINEIHSEAEKNLGLRPGATASIRNNRGVISGGQGNTGPGGFPIARPGTGGLMPGMPGTRKMPGMPGMDNDNWEMPRTRSMSRGDNPSIHGAGRGQSPLIARSPTMNPKLLPQGSGGFISGKSSALLQGSGMPSVRPSTGGFVSEAAPQYSVPAKPSAPPVSIAPAPAVKSLASVPRLNPEDLRRKTVSLLEEYFSIRLLDEALQCLEELNSPAYHPEFVKESISLALERSPPCVEPVANLLEYLFIKKMLTASDIGTGCLRYGSMLDDIAIDLPKAPNNFGEIVGRLILAGGMDFKVVKEILANLEDDMLRKAIFNATIRVISSASGHGILDSQASDVEACQSLLE* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01318 799 Gene3D - 215 454 - -
Pte11g01318 799 MobiDBLite consensus disorder prediction 1 27 - -
Pte11g01318 799 FunFam Eukaryotic translation initiation factor isoform 4G-2 206 442 - -
Pte11g01318 799 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 64 792 IPR045208 GO:0003743
Pte11g01318 799 MobiDBLite consensus disorder prediction 531 552 - -
Pte11g01318 799 SUPERFAMILY ARM repeat 629 779 IPR016024 -
Pte11g01318 799 Gene3D - 627 793 - -
Pte11g01318 799 SMART ma3_7 635 747 IPR003891 -
Pte11g01318 799 SUPERFAMILY ARM repeat 208 444 IPR016024 -
Pte11g01318 799 Coils Coil 296 330 - -
Pte11g01318 799 Pfam MA3 domain 635 746 IPR003891 -
Pte11g01318 799 Pfam MIF4G domain 215 441 IPR003890 GO:0003723|GO:0005515
Pte11g01318 799 ProSiteProfiles MI domain profile. 634 756 IPR003891 -
Pte11g01318 799 MobiDBLite consensus disorder prediction 115 151 - -
Pte11g01318 799 SMART if4_15 215 441 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01318 Pte-Chr11 31452171 31457444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01318 1 797 Eukaryotic Initiation Factors Gene Family AT5G57870 65.500 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01318 K03260 - qsa:O6P43_022212 1127.08