Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01306 ATGGCTGCCAACAAGAGCTATGAAGCTCTTCAAATTGATAGCTTGAACGGGAAAGAGACGGATCAAGAGAAACTGCACGCTGAAAATAGTGAACAACAACAAGACTACGATGAAGGAAAAGAAGACAAAAGAAGTGATGATGAAATGCAATCTGATGAGGTGCAACCTGCGCAGTCATATATGTCTGAAGGACCTCAGAGTGGCGCTCAGCTAATAAAGGCCAAATTCGAAACCCTAGGTGTGAAGTCCTCGGGGAGTGATCAGAGTCCAGGTTTGCCGTTGAGTTCTACTACAATAGAGTCAACAGGGGAAGCTCAATTAAAGGATCAAATTGGAGCATTAGAGAAGGAGCCTATGGCAATAGTGGGAGTCGAGGTAGCTCAAGCTCAAACTAAAAGCCAAGTTCAGCTGTCAGTGTCCCCAGCTACGTTATCAGAAGTATCGCCACCCTCTGTGATCCAACCTCTTTCATCTGCTCGCAGTCCTGTTATACCAGATCATAGCATGTTGACCCCAACAGGAAGTAGCTTCCATATGCTCAAGTCAGATCAGAAAACTCATTCTAATGGCAAAAATGTAACTCCAATTTTGGTCAGAAAGTCATCAACTTCTGATGGATATAATTGGCGGAAGTATGGTCAGAAGCAAGTAAAGAGTCCTACAGGTTCTCGGAGCTATTATAGATGTACACATTCTGACTGTAGTGCAAAAAAGATTGAATGCTGCAATAACTTAGGCCATATAGTTGAGATTGTTTACAGAAGTCATCATTCTCACGATCCACCCAAGAAGGTTAACTCCAGTAAGGAAAGTAAGCTCACTCAATGCAGTTTGTCACTTGTAGAAAATAGTGTCATAGATCCTATTAGAATGCTTGATGATATAGATTCATCTACTTCTTCAAAAGAACCTGTTCAACTAACACCCTCCGCCTCAGAAGTAAAGCAACAAAGTTCTTGCAGCCCAATGGATAATGGTGAAGCTAAGGTCAGGGAAGAGCATGTTAACGAGCTAGAGCCGAGAAAAAGATTGAAGAAAGAAGAGTTTACATACTCAGATTCTCACATGAAACCTGGAAAGAAACCCAAGTTTGTTGTGCACGCAATGGGTAATGTCTCGATCTCAGGTGATGGATATCGTTGGCGCAAGTATGGACAGAAAATGGTAAAGGGAAATCCTAATCCAAGAAACTATTATAGATGCACTTCTGCTGGATGTCCTGTCCGTAAACACATTGAGACGGCCGTTGATAACACGAGTGCCGTCGTAATAACATATAAGGGAGTACATGACCATGATATGCCAGTGCCGAAGAAGCGGCATGGGCCTCCAAGTGCTCCTCTTATTGCCGCTACTACACCTACCGCTTCAGTGAATAGTTTACAGCCTAAGAAAGTTGAGACCTCACATAATCAGATATCTTCTACTCAGAGGCCAGTGGACAAAGGAGAATTGACAAGTCAAGCCATGGACCTCGGAGGTGAGAAGGCAATGGAGTCAGCACGAACTCTTCTAAGTATAGGTTTTGAAATCAAACCTTGCTAG 1545 0.4311 MAANKSYEALQIDSLNGKETDQEKLHAENSEQQQDYDEGKEDKRSDDEMQSDEVQPAQSYMSEGPQSGAQLIKAKFETLGVKSSGSDQSPGLPLSSTTIESTGEAQLKDQIGALEKEPMAIVGVEVAQAQTKSQVQLSVSPATLSEVSPPSVIQPLSSARSPVIPDHSMLTPTGSSFHMLKSDQKTHSNGKNVTPILVRKSSTSDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCSAKKIECCNNLGHIVEIVYRSHHSHDPPKKVNSSKESKLTQCSLSLVENSVIDPIRMLDDIDSSTSSKEPVQLTPSASEVKQQSSCSPMDNGEAKVREEHVNELEPRKRLKKEEFTYSDSHMKPGKKPKFVVHAMGNVSISGDGYRWRKYGQKMVKGNPNPRNYYRCTSAGCPVRKHIETAVDNTSAVVITYKGVHDHDMPVPKKRHGPPSAPLIAATTPTASVNSLQPKKVETSHNQISSTQRPVDKGELTSQAMDLGGEKAMESARTLLSIGFEIKPC* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01306 514 Pfam WRKY DNA -binding domain 205 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g01306 514 Pfam WRKY DNA -binding domain 377 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g01306 514 MobiDBLite consensus disorder prediction 1 74 - -
Pte11g01306 514 MobiDBLite consensus disorder prediction 295 324 - -
Pte11g01306 514 SUPERFAMILY WRKY DNA-binding domain 368 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g01306 514 ProSiteProfiles WRKY domain profile. 370 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g01306 514 MobiDBLite consensus disorder prediction 456 483 - -
Pte11g01306 514 Gene3D WRKY domain 190 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g01306 514 Gene3D WRKY domain 360 436 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g01306 514 MobiDBLite consensus disorder prediction 146 167 - -
Pte11g01306 514 MobiDBLite consensus disorder prediction 295 340 - -
Pte11g01306 514 SMART WRKY_cls 375 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g01306 514 SMART WRKY_cls 203 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g01306 514 FunFam WRKY transcription factor 363 436 - -
Pte11g01306 514 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 143 468 IPR044810 GO:0003700
Pte11g01306 514 MobiDBLite consensus disorder prediction 326 340 - -
Pte11g01306 514 SUPERFAMILY WRKY DNA-binding domain 200 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g01306 514 MobiDBLite consensus disorder prediction 52 66 - -
Pte11g01306 514 MobiDBLite consensus disorder prediction 17 51 - -
Pte11g01306 514 ProSiteProfiles WRKY domain profile. 198 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01306 Pte-Chr11 31364470 31369358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01306 37 515 WRKY Transcription Factor Family AT4G30935 45.051 7.40e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte11g01306 WRKY 2.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01306 - - qsa:O6P43_022193 531.561