Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01300 ATGGCTGACGATAAAGTTAGAGAAGGCCAACCATACTTGCTTCACGGCAAGTATGAGCTTGGTCGCCTTCTAGGTCACGGTACTTTTGCCAAAGTCTACCATGCCAAGAACTTGCAGAGTGGAAAAAATGTTGCCATGAAGGTGGTTGGTAAAGAAAAAGTGATTAAGGTCGGCATGATGGAACAGATCAAAAGGGAAATTTCTGTAATGAAGATGGTCAAGCATCCAAACATTGTTGACCTTCATGAAGTTATGGCGAGCAAATCGAAGATCTATTTCGCTATGGAGCTTGTCCGAGGTGGTGAGCTCTTCGCTAGAGTTGCGAAAGGTCGATTGAGAGAGGATGTTGCCAGAGTTTACTTCCAGCAATTGATTTCCGCCATTGATTTTTGCCATAGCCGTGGAGTTTACCACAGAGATCTGAAACCCGAGAATTTGTTGCTAGATGAAGATGGGAATCTCAAAGTTACCGACTTTGGTCTCAGTGCCTTCGCTGAGCACCTCCGGCAAGATGGTTTGCTGCACACCAGTTGTGGAACTCCGGCATATGTTGCACCAGAGGTGCTTGGGAAGAAAGGATATGATGGTGCCAAGACTGATATCTGGTCTTGTGGTGTCATTCTCTATGTGCTTCTTGCGGGGTTCTTACCGTTTCAAGATGACAACTTGGTAGCCATGTATCGGAAAATTTATAAGGGTGACTTCAAATGCCCGCCATGGTTTTCATCAGAAGCTCGTCGGCTTATCACCAAAATGCTCAAGCCGAATCCTAAAACCAGAATCACAATCTCCAAGATCATGGACTCGTCTTGGTTCCAAAAATCAGTTCCGAGACACGCAAAGAGCAACGACGAACTAGAATTTGAATGGTTGGACGAGGGATGCTGTGAGAAATCAAAGCAGCAACCTGGCCAGCAACCTGAGACTATGAACGCCTTTCACATTATATCGCTGTCACAAGGGTTCGATTTGTCGCCTATGTTTGAAGAGAAAAGGAGGGAAGAGAAGGAGGAGCTGAGGTTTGCAACTACTACGCCTGCAAGCAGCGTGATATCAAAATTGGAGGAGGCGGCCAAATCGGGGAAGTTCAATGTGAAAAAGAGTGATACCAAGGTGAGGCTGCAGGGACGAGAGTGTGGGAGGAAAGGAAAGCTAGCAATTGCAGCTGAGATATATGCAGTGACGCCATCGTTTTTGGTGGTGGAGGTGAAGAAGGACCATGGGGATACCTTAGAGTACAATCAGTTCTGTAGCAAAGAGCTCCGGCCAGCACTCAAGGACATAGTCTGGACATCCCAGGCGGAGAATTCGATACCTGCTTGA 1323 0.4671 MADDKVREGQPYLLHGKYELGRLLGHGTFAKVYHAKNLQSGKNVAMKVVGKEKVIKVGMMEQIKREISVMKMVKHPNIVDLHEVMASKSKIYFAMELVRGGELFARVAKGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSAFAEHLRQDGLLHTSCGTPAYVAPEVLGKKGYDGAKTDIWSCGVILYVLLAGFLPFQDDNLVAMYRKIYKGDFKCPPWFSSEARRLITKMLKPNPKTRITISKIMDSSWFQKSVPRHAKSNDELEFEWLDEGCCEKSKQQPGQQPETMNAFHIISLSQGFDLSPMFEEKRREEKEELRFATTTPASSVISKLEEAAKSGKFNVKKSDTKVRLQGRECGRKGKLAIAAEIYAVTPSFLVVEVKKDHGDTLEYNQFCSKELRPALKDIVWTSQAENSIPA* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01300 440 CDD STKc_SnRK3 17 271 - -
Pte11g01300 440 FunFam Non-specific serine/threonine protein kinase 8 296 - -
Pte11g01300 440 SUPERFAMILY Protein kinase-like (PK-like) 15 273 IPR011009 -
Pte11g01300 440 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Pte11g01300 440 Gene3D Kinase associated domain 1, KA1 304 431 - -
Pte11g01300 440 FunFam Non-specific serine/threonine protein kinase 10 97 - -
Pte11g01300 440 Gene3D Transferase(Phosphotransferase) domain 1 100 278 - -
Pte11g01300 440 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Pte11g01300 440 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01300 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pte11g01300 440 FunFam Non-specific serine/threonine protein kinase 305 430 - -
Pte11g01300 440 CDD CIPK_C 311 426 - -
Pte11g01300 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 427 - -
Pte11g01300 440 Pfam NAF domain 307 367 IPR004041 GO:0007165
Pte11g01300 440 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Pte11g01300 440 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01300 440 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01300 Pte-Chr11 31328513 31330417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01300 13 432 CBL-interacting serine-threonine protein kinases AT4G30960 76.651 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte11g01300 Pkinase 1.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01300 - K07198 qsa:O6P43_002997 739.184