Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01289 ATGTCTCTGAGAAAACCACCACTACCTCGTCTCCTTCTCAACAACGTCTCTTGCATGAGAAATGCCCAACAAATTCTTCGTCATGTAAATGTGTCACTTCACGACGGCAGTGCACTAGTTCTTACAGGTACAAATGGCTCTGGAAAATCCACCTTTCTACGGATGTTGGCTGGATTTTCTCGCCCTTCTGCTGGTGAAATACTGTGGAATGGTCACAACATTACTCAATCCGGAATCTTTCACCAGTATAAGCTTCAGCTTAATTGGCTTTCCCTCAAAGATGCCATTAAGGAAAAGTTTACGGTTCTTGATAATGTCCAGTGGTTTGAACTCCTTGAAGGCAAGATGGGGAAATCACTTCCTGCTATTGAGCTTATGGGGCTTGGGAGATTGGCAAAAGAAAAGGCAAGGATGCTGTCAATGGGTCAGCGCAAAAGGTTACAACTTGCTAGATTGCTTGCCATAGATCGTCCAATTTGGTTACTTGACGAGCCTTCAGTTGCCTTGGATGATGAAGGAGTGAAGTTACTGGAGTATATTATTGCAGAACACAGAAAGAAGGGTGGCATTGCGATTGTGGCAACACATTTACCAATTGAGATTGAAGATGCTATGGTCTTGAGGTTGCCACCAAGGTTCCCTCGGAGGATGACATTGGTGGACATGCTTGACCGTGCAGACATTTAA 687 0.444 MSLRKPPLPRLLLNNVSCMRNAQQILRHVNVSLHDGSALVLTGTNGSGKSTFLRMLAGFSRPSAGEILWNGHNITQSGIFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFELLEGKMGKSLPAIELMGLGRLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKKGGIAIVATHLPIEIEDAMVLRLPPRFPRRMTLVDMLDRADI* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01289 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Pte11g01289 228 Gene3D - 8 208 IPR027417 -
Pte11g01289 228 SMART AAA_5 35 223 IPR003593 GO:0016887
Pte11g01289 228 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Pte11g01289 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 202 IPR027417 -
Pte11g01289 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 223 IPR005895 GO:0017004|GO:0022857
Pte11g01289 228 NCBIfam heme ABC exporter ATP-binding protein CcmA 13 209 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01289 Pte-Chr11 31233664 31239744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01289 24 178 Calmodulin-binding Proteins AT2G36910 28.070 7.68e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01289 - - thj:104822364 409.838