Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01277 ATGACCTCTGACATCTCTTTTGAAGATGTTAGGAACGAGACAGTTGATCTTGAGAAGCTCCCAGTTGAGGAGGTTTTCAAGCAGCTGAAATGTAGCAGAGAGGGTCTTACGTCCGAGGAGGGGCAGAAAAGGCTCCAGGTCTTTGGCCCGAACAAGCTGGAGGAGAAGAAGGAGAGCAAACTGCTGAAGTTCTTGGGATTCATGTGGAATCCTCTCTCCTGGGTTATGGAGGCTGCAGCAATCATGGCCATTGCATTGGCCAATGGAGGAGGCAGGGCACCCGACTGGCCTGATTTCGTTGGTATTGTGGTTTTGCTCCTCATCAACTCCACCATCAGCTTTATTGAAGAAAACAATGCCGGCAATGCAGCTGCTGCTTTGATGGCTGGTCTTGCACCCAAAACGAAGATATTGAGGGATGGCAAATGGAGTGAGCAAGATGCAGAAATTCTGGTTCCAGGAGACTTGATCAGCATCAAGCTCGGTGACATTGTCCCAGCTGATGCTCGTCTCTTGGAGGGTGATCCACTCAAGATTGACCAGGCTGCTCTTACCGGTGAATCCTTGCCAGTGACCAAGAACCCGGGAGATGAGGTCTTTTCAGGCTCTACATGCAAGCAGGGTGAGATTCAAGCTGTTGTGATTGCCACTGGTGTCCACACCTTCTTTGGCAAAGCTGCTCATCTTGTTGACAGCACCAACCAAGTTGGTCATTTCCAAAAGGTGTTGACAGCCATTGGTAACTTCTGTATCTGCTCCATAGCTGTAGGAATGGTGATCGAAATCATAGTGATATTCCCAATCCAGCATAGGCCTTACAGGGAAGGTATTGACAATTTGTTGGTGCTTCTGATCGGAGGTATCCCAATTGCCATGCCAACTGTCTTGTCAGTCACCATGGCTATCGGTTCTCACCGCCTCTCTCAGCAAGGTGCCATCACCAAGAGGATGACAGCTATCGAAGAAATGGCAGGCATGGACGTACTTTGCAGTGACAAGACTGGAACCCTCACCCTCAACAAGCTTACTGTTGACAAGAATCTCATTGAGGTGTTCCCCAAGGACGTGGATAAGGATGCTATTGTGTTGTATTCTGCCAGGGCATCTAGAACTGAAAACCAAGACGCTATTGATGCATCCATCGTTGGAATGTTGGCTGATCCAAAAGAGGCCAGAGCAGATATCACTGAGGTTCACTTCTTGCCCTTCAATCCTGTGGAGAAACGCACAGCCATTACCTACATTGACAACCAAGGAAACTGGCACAGGTCAAGCAAGGGTGCTCCTGAGCAAATCATTGAGCTCTGCGAACTGAAAGGAGAGGCATTGAAGAAGGCCCATGACATCATTGGCAAATTTGCTGATCGCGGTCTTCGCTCATTGGGCGTTGCTAGACAGACTGTTCCGGAGAAGACCAAGGAGAGTGCCGGATCTCCATGGGAATTCTTAGGTCTGATGCCTCTTTTTGACCCACCAAGGCATGATAGTGCAGAGACAATCCGCAGAGCCCTTGAACTTGGAGTCCATGTCAAGATGATCACTGGTGACCAGCTTGCCATAGGGAAAGAAACAGGCCGTAGACTTGGTATGGGAACCAATATGTATCCATCATCCTCTCTCCTTGGCCAGGACAAGGACGAGTCTGCTGATTCAATTAACATTGATGAGCTTATTGAGAAGGCTGACGGCTTTGCCGGAGTTTTTCCAGGTAACCAATATATCCATTTACATATATACATGCCTGTATGTTTTTACAATAAGCTCATGATTGAACTTTGTGTTGCAGAGCACAAGTATGAGATTGTCAAGAGATTGCAGGACAAGAAGCACATTGTTGGCATGACTGGAGATGGTGTGAATGATGCCCCAGCACTCAAGAGGGCAGACATTGGCATTGCAGTGGATGATGCAACTGACGCTGCACGGAGTGCTTCAGACATTGTTTTGACAGAGCCAGGATTGAGTGTCATTGTTAGTGCAGTGTTGACTAGCAGGGCCATCTTCCAAAGGATGAAGAATTATACAATCTATGCCGTTTCCATCACGATCCGCGTTGTGCTTGGTTTCATGCTTGTCTCACTGATCTGGAAGTTTGACTTCTCACCATTCATGGTTCTCATCATTGCCGTCTTGAATGACGGGACCATCATGACAATCTCTAAGGATAGAGTGAAGCCATCTCCACTGCCAGACTCATGGAAGCTCAGAGAAATCTTTGCCACTGGCATTGTTCTTGGAGCCTACATGGCAATCATGACTGCTGTCTTCTTCTATCTCATGCATGACACTGACTTCTTCACAGAAACATTTGGAGTGAGACCAATCAGCCAACACCACGAAGAGCTCAACTCAGCTTTGTATCTTCAAGTTAGTATCATCAGTCAGGCTCTCATCTTCGTCACCAGGTCAAGGAGTTGGTCCTATTTTGAACGCCCTGGATTCATGCTTGTTGGAGCCTTCCTCATTGCTCAGCTGTTGGCCACTCTCATTGCTGTATATGCAGAATGGAGCTTCGCCAAGATCACCGGAATTGGCTGGGGATGGGCTGGAATCATTTGGCTATACACCATCATTACCTACATCCCTCTTGACATCCTCAAGTTTGCGATCCGCTATGCATTGAGTGGAGGGGCTTTGGACAACGCTGTTGAGAACAAGACTGCTTTCACAACCAAGAAGGATTGCGGAAAAGGAGAGAGGGAGGCACAATGGGCCATGGCACAACGCACATTGCATGGTCTTCAACCCCCAGCTGAAGCTGTCTTTGCTGACAAGAACTCGAGAGAGCTCAATGAAATTGCAGAACAAGCCAAAGCGTGCTGA 2823 0.48 MTSDISFEDVRNETVDLEKLPVEEVFKQLKCSREGLTSEEGQKRLQVFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGRAPDWPDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPKTKILRDGKWSEQDAEILVPGDLISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTKNPGDEVFSGSTCKQGEIQAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVIEIIVIFPIQHRPYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPKDVDKDAIVLYSARASRTENQDAIDASIVGMLADPKEARADITEVHFLPFNPVEKRTAITYIDNQGNWHRSSKGAPEQIIELCELKGEALKKAHDIIGKFADRGLRSLGVARQTVPEKTKESAGSPWEFLGLMPLFDPPRHDSAETIRRALELGVHVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDESADSINIDELIEKADGFAGVFPGNQYIHLHIYMPVCFYNKLMIELCVAEHKYEIVKRLQDKKHIVGMTGDGVNDAPALKRADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRVVLGFMLVSLIWKFDFSPFMVLIIAVLNDGTIMTISKDRVKPSPLPDSWKLREIFATGIVLGAYMAIMTAVFFYLMHDTDFFTETFGVRPISQHHEELNSALYLQVSIISQALIFVTRSRSWSYFERPGFMLVGAFLIAQLLATLIAVYAEWSFAKITGIGWGWAGIIWLYTIITYIPLDILKFAIRYALSGGALDNAVENKTAFTTKKDCGKGEREAQWAMAQRTLHGLQPPAEAVFADKNSRELNEIAEQAKAC* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01277 940 Gene3D - 95 326 - -
Pte11g01277 940 PANTHER CALCIUM-TRANSPORTING ATPASE 22 910 - -
Pte11g01277 940 Gene3D - 327 572 IPR023214 -
Pte11g01277 940 NCBIfam plasma-membrane proton-efflux P-type ATPase 35 573 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte11g01277 940 SUPERFAMILY Calcium ATPase, transduction domain A 133 230 IPR008250 -
Pte11g01277 940 Gene3D - 342 489 IPR023299 GO:0000166
Pte11g01277 940 PRINTS P-type cation-transporting ATPase superfamily signature 330 344 - -
Pte11g01277 940 PRINTS P-type cation-transporting ATPase superfamily signature 506 516 - -
Pte11g01277 940 PRINTS P-type cation-transporting ATPase superfamily signature 180 194 - -
Pte11g01277 940 PRINTS P-type cation-transporting ATPase superfamily signature 484 495 - -
Pte11g01277 940 PRINTS P-type cation-transporting ATPase superfamily signature 615 634 - -
Pte11g01277 940 PRINTS P-type cation-transporting ATPase superfamily signature 638 650 - -
Pte11g01277 940 SFLD Haloacid Dehalogenase 312 667 - -
Pte11g01277 940 SMART Cation_ATPase_N_a_2 16 88 IPR004014 -
Pte11g01277 940 Coils Coil 923 940 - -
Pte11g01277 940 FunFam Plasma membrane ATPase 133 217 - -
Pte11g01277 940 CDD P-type_ATPase_H 35 868 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte11g01277 940 FunFam ATPase 4 plasma membrane-type 590 842 - -
Pte11g01277 940 SFLD p-type atpase 312 667 IPR044492 -
Pte11g01277 940 Gene3D - 133 217 - -
Pte11g01277 940 NCBIfam HAD-IC family P-type ATPase 102 360 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01277 940 NCBIfam HAD-IC family P-type ATPase 596 695 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01277 940 FunFam Plasma membrane ATPase 342 489 - -
Pte11g01277 940 FunFam Plasma membrane ATPase 589 663 - -
Pte11g01277 940 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Pte11g01277 940 Gene3D - 595 652 IPR023214 -
Pte11g01277 940 Pfam haloacid dehalogenase-like hydrolase 326 629 - -
Pte11g01277 940 SUPERFAMILY HAD-like 326 662 IPR036412 -
Pte11g01277 940 ProSitePatterns E1-E2 ATPases phosphorylation site. 332 338 IPR018303 -
Pte11g01277 940 Pfam E1-E2 ATPase 132 309 - -
Pte11g01277 940 Gene3D - 653 842 - -
Pte11g01277 940 PRINTS H+-transporting ATPase (proton pump) signature 446 464 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01277 940 PRINTS H+-transporting ATPase (proton pump) signature 561 577 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01277 940 PRINTS H+-transporting ATPase (proton pump) signature 787 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01277 940 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 874 IPR023298 -
Pte11g01277 940 FunFam Plasma membrane ATPase 483 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01277 Pte-Chr11 31077756 31082237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01277 1 938 Primary Pumps ATPases AT3G42640 80.810 0.0 1537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01277 K01535 - jre:109019497 1534.62