Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01266 ATGGCTTTTCAAGAACATTTGCTTAATCAAATGGCTTTTCAACCTTTCAGTGACGACCCACATACACACTCCCAGTCTAGTCAAAGCAGAGACATGCAGATGCAAAGGTTGAGACCACTTAACATGAACAACTCAATTAATCTCAGGCAGCAGGATTTCTTGCACTTGCAGAATGACCATGTCCAGGACATGAGTAAGAGCAGTAATCGTGGTGGTGATCGAAATCGGACTGAGAGTAGCTCTGAGTCTGAGGATTTGATGAGTGCGTACAAGGCTGACATTTTAGCACACCCTTTGTACGAGCAGCTGCTGGCGGCTCATGTTTCGTGCTTGAGGATTGCCACGCCAGTTGACCAGTTGCCAAGGATCGACGGGCAGCTGGCACAGTCTCAGCGCGTGGTGGACAAGTATTCTTCCGTTGTTGGCAGTGGTGTGGTAGATGACAAGGAGCTTGATCAGTTTATGACACATTATGTTCTACTGCTCTCCGCCTTTAAAGAACAATTGCAACAACATGTCCGTGTTCATGCTATGGAAGCAGTAATGGCTTGTTGGGAGCTCGAACAATCTCTACAAGGTTTGACTGGTGTATCTCCTGGAGAAGGAACAGGTGCGACAATGTCTGATGATGAGGATGACCAGGCAGACAGTGACATCAACTTATGTGAAGGAAATTTGGATGGACCTGATAGTCTTGGCTTTGGTCCTCTCCTTCCCACTGAAACCGAGAGATCCTTGATGGAGCGTGTGCGGCAAGAGTTGAAGCATGAGTTAAAACATGTAAGAGAATGCTCTAACTTTTGCAGTATACCTGTAAGAACAAATTTGCTGCAGCTTCACACTTTCAGTAACTCAGGGTTACAAGGAGAAGATTGTGGACATAAGAGAAGAAATTCTCAGGAAGAGGAGAGCAGGGAAGCTGCCTGGTGA 930 0.4634 MAFQEHLLNQMAFQPFSDDPHTHSQSSQSRDMQMQRLRPLNMNNSINLRQQDFLHLQNDHVQDMSKSSNRGGDRNRTESSSESEDLMSAYKADILAHPLYEQLLAAHVSCLRIATPVDQLPRIDGQLAQSQRVVDKYSSVVGSGVVDDKELDQFMTHYVLLLSAFKEQLQQHVRVHAMEAVMACWELEQSLQGLTGVSPGEGTGATMSDDEDDQADSDINLCEGNLDGPDSLGFGPLLPTETERSLMERVRQELKHELKHVRECSNFCSIPVRTNLLQLHTFSNSGLQGEDCGHKRRNSQEEESREAAW* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01266 309 Pfam KNOX2 domain 145 195 IPR005541 GO:0003677|GO:0005634
Pte11g01266 309 MobiDBLite consensus disorder prediction 196 215 - -
Pte11g01266 309 MobiDBLite consensus disorder prediction 62 84 - -
Pte11g01266 309 MobiDBLite consensus disorder prediction 287 309 - -
Pte11g01266 309 MobiDBLite consensus disorder prediction 290 309 - -
Pte11g01266 309 MobiDBLite consensus disorder prediction 66 81 - -
Pte11g01266 309 SMART KNOX2_2 141 196 IPR005541 GO:0003677|GO:0005634
Pte11g01266 309 MobiDBLite consensus disorder prediction 14 33 - -
Pte11g01266 309 Pfam KNOX1 domain 89 131 IPR005540 GO:0003677|GO:0005634
Pte11g01266 309 SMART KNOX1_2 88 132 IPR005540 GO:0003677|GO:0005634
Pte11g01266 309 MobiDBLite consensus disorder prediction 15 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01266 Pte-Chr11 30924971 30930357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01266 71 259 Homeobox Transcription Factor Family AT5G11060 72.539 5.07e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01266 - - gmx:100803034 338.576