Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01248 ATGGCAAAAGGAAAGCTGATATTAATATGCCAATTTGGTGGTGAATTTAAGACAAAGGATGATGGATCTATGTCATATACTGGTGGAGAAGCACATGCCGTAGAAATTAATCACGAAACACTATTTAGTGACCTCAAGTTCAAGTTTTCCGAACTTTGGAATTTGGATTATAAGACCTTGAGTGTCAAGTACTTTCTCCCAGGCAACTGCCGAACTCTTATTTCTGTATCTAATGACAAGGACCTAAAGAGGCTGTACAATTTCCACAATGATTCTGCTGCTGGTTATGTGTTCATCTCTGGGAAAGAAGGTTTTGATCGCGAAGCAGTTGACATTTGGATTGGAAACAGTAATATAAAAGTTGCTGAACCTGTAACCCCCAAAGTTGACTCTGCTAGTAAAACCACCAAGCAAGCTGTTTCTACTCGAGCTAAGACCTGTAAATCACATAAGTGCTTGAAATGGTTTGCATTATGTCACATTGACAATGCGATTGTAGAACTTGTTTGTCAAAATTTCATCTGTTAG 528 0.3845 MAKGKLILICQFGGEFKTKDDGSMSYTGGEAHAVEINHETLFSDLKFKFSELWNLDYKTLSVKYFLPGNCRTLISVSNDKDLKRLYNFHNDSAAGYVFISGKEGFDREAVDIWIGNSNIKVAEPVTPKVDSASKTTKQAVSTRAKTCKSHKCLKWFALCHIDNAIVELVCQNFIC* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01248 175 SMART PB1_new 19 102 IPR000270 GO:0005515
Pte11g01248 175 SUPERFAMILY CAD & PB1 domains 20 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01248 Pte-Chr11 30740183 30743117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01248 4 91 MAP Kinase Kinase Kinase AT1G79570 33.333 4.69e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01248 - - qlo:115977132 177.563