Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01244 ATGTCCACCGCCCACTCCAATGGAGATCTCGAGGCCCTCTCTCAACCATTACTCTCTTCTAGATCCCTTGTCAATTCAACCTCTCAGGTTGCCATTGTAGGTGCCAATGTCTGCCCAATTGAGAGCCTTGACTACGAGATTGTTGAGAACGAGTTATTTAAGCAGGATTGGAGGAGTAGAGGGAAAGTTCAAATTCTTCAATACATATCCCTGAAATGGATATTATGCTTTCTGATTGGTTTTATTGTCAGCCTAATTGGCTTTTTCAATAACCTTGCGGTTGAGAATATTGCTGGGTTGAAGTTCGTGGTCACCTCTAACATGATGTTGGAGAATAGGTATCTCATGGCTTTTCTTGTGTTCTCTATCTCGAATTTGGTACTTACTCTCTTTGCATCTCTAATCACGGCTTCCGTTGCACCAGCCGCAGCTGGTTCTGGTATACCAGAAGTGAAAGCTTATCTGAATGGTGTAGATGCCCCTGAGATATTCAATTTAAGAACATTGTTTGTGAAGATTGTAGGAAGCATCTCTGCTGTATCTTCATCTCTTCTGGTTGGAAAGGCTGGGCCCATGGTGCATACAGGTGCATGTATCGGGTCATTGTTAGGTCAGGGTGGTTCAAAAAGATATGGTTTGAGATGGAGATGGCTGCGATATTTTAAGAATGACCGAGATCGTAGGGATCTAATAACATGTGGATCAGCTGCAGGAATAGCTGCTTCCTTTCGTGCCCCTGTTGGTGGTCTGCTGTTTGCTCTTGAAGAGATGGCATCATGGTGGAGGAGTGCTTTACTCTGGAGAGCTTTCTTCGCAACAGCAGTAGTTGCGATTGTGCTTCGGGCTTTAATTGATGTTTGTCAAAGTGGAAAATGTGGGTTATTTGGCAAAGGTGGTCTGATAATGTTTGATGCTTATTCAGCAAGCATCTCATATCACCTTGAGGATGTGCCTCGTGTAATTATTCTCGGAGTCATTGGAGGCATATTAGGAAGCTTATACAATTTCCTGTTAGAGAGACTTCTCCGTGTTTATAATCTTATTAACGAGAAAGGAATTGCTTACAAAATTTTTCTTGCGTGCTTTATTTCCATTTTCACATCCTGTCTTCTGTTTGGCTTGCCGTGGATTGTATCTTGCCAACCTTGTCCACCTGATGCAAAAGAGGCTTGTCCTACAATCGGCCGCTCTGGTAACTACAAGAAATTCCAGTGTCCTCCTGGTCACTACAATGATCTTGCCAGTCTGATATTTAACACAAATGATGATGCAATCAAGAATCTGTTTAGCAGGAACACTGACAAAGAGTTTGAACACTCATCTGTGCTGATCTTTTTTGTCACATGCTTCTGCTTAAGTATCTTTAGTTATGGAATTGTTGCCCCTGCTGGTCTTTTTGTTCCAGTCATTGTGACTGGTGCGACTTATGGACGTTTTGCTGGAATGCTAGTAGGCAAGAACTCTAATCTTGACCATGGCCTTTATGCTGTTCTGGGTGCTGCTTCCTTTCTTGGTGGATCCATGAGGATGACAGTTTCACTCTGTGTAATCATATTAGAATTGACGAATAATTTGTTGTTGCTACCGTTAATAATGTTGGTGCTTCTCATTTCAAAGACTGTTGCTGATGCTTTCAACGGAAACATTTACGACCTTATCATGAAAGCAAAGGGATTCCCTTACTTAGAAACTCATGCTGAGCCTTACATGAGGCAATTGACAGTTTCTGATGTGGTCACAGGCCCACTCCAACTCTTTCACGGTATTGAAAAGGTCAGTCATATAGAGTCTGTCCTCAGACGTTCACATCATAACGGTTTCCCGGTTATTGACGAGTCACAAGATTCTGAAAATCCAGTTTTGTTTGGAATCATCCTTCGTGCTCATCTTCTCAAATTATTGAAGAAAAAAACATTCTCAGCTACACCAGAGCCTGCAAGTAGTTATGTCTTTAAGCAATTTACAGCCAATGATTTTGCAAAGAAGGGTTTAGGCAAGGGTGATACGATAGAAGATATTCAGTTAACAGAGGAGGAGAGAGAAATGTTTGTCGATCTTCATCCTTTTACCAATGCTTCTCCTTATACTGTTGTGGAAACAATGTCACTTGGAAAGGCCCTCACATTGTTTCGAAACGTTGGCTTGAGGCACCTGTTGGTAATACCAAAGATATCTGGTAGATCACCTGTAGTAGGTATGTTGACAAGGCATGATTTTATGCCGGAACATATTTTGGGGTTGCATCCTTCACTAGAGAACCGGAGGTGGAAAAGGTTGAGGTTACCTCTATTGAGTCAACTTATTTAG 2307 0.42 MSTAHSNGDLEALSQPLLSSRSLVNSTSQVAIVGANVCPIESLDYEIVENELFKQDWRSRGKVQILQYISLKWILCFLIGFIVSLIGFFNNLAVENIAGLKFVVTSNMMLENRYLMAFLVFSISNLVLTLFASLITASVAPAAAGSGIPEVKAYLNGVDAPEIFNLRTLFVKIVGSISAVSSSLLVGKAGPMVHTGACIGSLLGQGGSKRYGLRWRWLRYFKNDRDRRDLITCGSAAGIAASFRAPVGGLLFALEEMASWWRSALLWRAFFATAVVAIVLRALIDVCQSGKCGLFGKGGLIMFDAYSASISYHLEDVPRVIILGVIGGILGSLYNFLLERLLRVYNLINEKGIAYKIFLACFISIFTSCLLFGLPWIVSCQPCPPDAKEACPTIGRSGNYKKFQCPPGHYNDLASLIFNTNDDAIKNLFSRNTDKEFEHSSVLIFFVTCFCLSIFSYGIVAPAGLFVPVIVTGATYGRFAGMLVGKNSNLDHGLYAVLGAASFLGGSMRMTVSLCVIILELTNNLLLLPLIMLVLLISKTVADAFNGNIYDLIMKAKGFPYLETHAEPYMRQLTVSDVVTGPLQLFHGIEKVSHIESVLRRSHHNGFPVIDESQDSENPVLFGIILRAHLLKLLKKKTFSATPEPASSYVFKQFTANDFAKKGLGKGDTIEDIQLTEEEREMFVDLHPFTNASPYTVVETMSLGKALTLFRNVGLRHLLVIPKISGRSPVVGMLTRHDFMPEHILGLHPSLENRRWKRLRLPLLSQLI* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01244 768 Pfam Voltage gated chloride channel 129 543 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pte11g01244 768 Gene3D Clc chloride channel 64 563 - -
Pte11g01244 768 PRINTS Chloride channel signature 172 191 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pte11g01244 768 PRINTS Chloride channel signature 236 255 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pte11g01244 768 PRINTS Chloride channel signature 511 530 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pte11g01244 768 PRINTS Chloride channel signature 141 158 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pte11g01244 768 PRINTS Chloride channel signature 549 563 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pte11g01244 768 PRINTS Chloride channel signature 461 481 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pte11g01244 768 PRINTS Chloride channel signature 493 509 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Pte11g01244 768 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 20 746 - -
Pte11g01244 768 CDD CBS_pair_voltage-gated_CLC_euk_bac 565 742 - -
Pte11g01244 768 SUPERFAMILY Clc chloride channel 50 564 IPR014743 -
Pte11g01244 768 Gene3D - 564 740 IPR046342 -
Pte11g01244 768 FunFam Chloride channel ClC3 64 382 - -
Pte11g01244 768 SUPERFAMILY CBS-domain pair 565 740 IPR046342 -
Pte11g01244 768 ProSiteProfiles CBS domain profile. 689 750 IPR000644 -
Pte11g01244 768 CDD ClC_6_like 41 562 - -
Pte11g01244 768 PRINTS Plant CLC chloride channel signature 413 429 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pte11g01244 768 PRINTS Plant CLC chloride channel signature 271 281 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pte11g01244 768 PRINTS Plant CLC chloride channel signature 289 296 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pte11g01244 768 PRINTS Plant CLC chloride channel signature 46 54 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pte11g01244 768 PRINTS Plant CLC chloride channel signature 257 265 IPR002251 GO:0005247|GO:0006821|GO:0016020
Pte11g01244 768 Pfam CBS domain 693 739 IPR000644 -
Pte11g01244 768 SMART cbs_1 693 744 IPR000644 -
Pte11g01244 768 SMART cbs_1 582 635 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01244 Pte-Chr11 30715361 30721202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01244 11 763 Ion Channels AT5G33280 76.260 0.0 1157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01244 K05016 - pop:18099916 1220.3