Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01233 ATGGAATTTGAGGAGCAAGAGGAAGAGATGGCTATCGAAACTGAGAGTTACGACTCGTTGGGCATCTCCACCAGGGTGAAAATGCCGGGCTCTGGGGGACCGGGTGAGATTTTGTCGGCACAACCAGTTAGGAATAATAACTTCATCAACCACACCAGCACCAACATCAACAGCAACAACGGCAATGGCAACAACAACAATAGCAGTAGTAACAAGCCCAGGTACAGGGAGTGTTTGAAGAATCATGCGGTGGGTATGGGTGGGCACGCTCTTGACGGGTGCGGAGAGTTCATGCCAGCCGGAGCTGAAGGCACACTGGACGGTCTCAAATGCGCAGCTTGCAATTGCCACCGGAATTTTCACCGCAAAGAAACTGATACAGGCGGTGTTGTTGGAGTCGGATTCGGGATCGGACCCACAGACCCGTATTTGTTGACCCACCATCCTCCACCTCAGTTCGCACCATACTATAGAACTCCAGCAGGGTACCTCCACGTAGGTGGACAGCAGCGAGCTGCTATGCTGGCTTTGCCTTCAACGTCAGGAGGAGGTGGCGGTGGTGGTACCCAGAGCACAAGGGAGCTAGACCAAGAGGATGTGTCGAACCCAAGTTCTGGAAGCGGGTCAAAGAAAAGGTTTAGGACAAAGTTCTCTCAAGAGCAGAAGGAAAAGCTGCTGGACTTGGCTGAGAAGTTGGGATGGAGGATACAGAAGCACGATGAAGCTGTGGTCCAGCAGTTCTGTACTGACTATGGTGTGAAGCGTCACGTGCTTAAGGTTTGGATGCATAACAACAAGCACACTCTTGGTAAGAAACCCTAG 822 0.5182 MEFEEQEEEMAIETESYDSLGISTRVKMPGSGGPGEILSAQPVRNNNFINHTSTNINSNNGNGNNNNSSSNKPRYRECLKNHAVGMGGHALDGCGEFMPAGAEGTLDGLKCAACNCHRNFHRKETDTGGVVGVGFGIGPTDPYLLTHHPPPQFAPYYRTPAGYLHVGGQQRAAMLALPSTSGGGGGGGTQSTRELDQEDVSNPSSGSGSKKRFRTKFSQEQKEKLLDLAEKLGWRIQKHDEAVVQQFCTDYGVKRHVLKVWMHNNKHTLGKKP* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01233 273 MobiDBLite consensus disorder prediction 176 217 - -
Pte11g01233 273 MobiDBLite consensus disorder prediction 47 73 - -
Pte11g01233 273 FunFam Zinc-finger homeodomain protein 2 197 271 - -
Pte11g01233 273 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 75 124 IPR006456 -
Pte11g01233 273 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 57 269 - -
Pte11g01233 273 MobiDBLite consensus disorder prediction 183 212 - -
Pte11g01233 273 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 74 124 IPR006456 -
Pte11g01233 273 Gene3D - 196 270 - -
Pte11g01233 273 Pfam ZF-HD protein dimerisation region 74 125 IPR006456 -
Pte11g01233 273 SUPERFAMILY Homeodomain-like 198 271 IPR009057 -
Pte11g01233 273 NCBIfam homeobox domain, ZF-HD class 210 266 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01233 Pte-Chr11 30565731 30567234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01233 72 269 ZF-HD Transcription Factor Family AT4G24660 53.030 3.76e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pte11g01233 ZF-HD_dimer 6.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01233 - - qsa:O6P43_025228 337.421