Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01217 ATGGCTTCAGCATCATGTGTAAATCTCCTTGAATTGGCTACCCCTCGAGCTCTTCCAAGGGTCATGACAGTTCCTGGGATAATTTCTAATATGGACGGTTTTAGTAGTAATGATGGGGATTCAGATGTGAGTTCTTCTGGTTGTCGTGAAAGAAAAATTATAGTGGCAAATATGCTACCAATACATGCGAAAAGGGATCCAGAAACTTCCAAATGGTGCTTCAGTTTTGACGAAGACTCAATTTTAGTACAATTAAGAGATGGTTTTTCTTCTGAAACAGAAGTTATTTATGTGGGCTCCCTCAAGGTTGAAGTTGATGCTGATGAGCAGGAAGAGATTGCTCAGAAACTGTTGGAGGAATTTAATTGTGTCCCTACCTTTCTACCATATGAACTCCAGAGAAGATTTTATATTGGCTTTTGTAAACAGCAGCTATGGCCGCTCTTTCATTATATGCTGCCAATGTGTCCAGATCATAGTGATCGTTTTGACCGCTTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCTGACAGAGTTATGGAAATAATCAATCCTGAAGAGGATTATGTTTGGGTCCATGACTATCACTTGATGCTTTTTCCAACATTTCTGAGGAAGAGATACAATGGTGTGAAAGTTGGGTTTTTCCTTCACAGCCCATTTCCCTCATCGGAAATATACAGAACTTTGCCTGTAAGGGATGAAATCATGAGGGGATTGCTGAATGCTGATTTAATAGGTTTTCATACTTTTGATTATGCCCGCCATTTTCTCTCGTGTTGTAGTAGAATGCTGGGACTGGACTACAAATCGAAACGTGGACATATTGGACTAGACTATTTTGGCAGAACCGTGTATGTCAAAATTTTGCCAGTAGGTGTTCACATGGGGAGGCTTGAATCGGTGTTAAACCTTCCATCTACAGCTGCCAAGGTAAAAGATATCTTGGAAGAACTCAAAGGTAGGAAAGTGATTCTTGGTGTTGATGACATGGATATATTTAAAGGCATCAGTTTGAAACTTCTAGCGGTAGAACAGCTGTTACAGCAGCATCCTGATTTGCAGGGCAAAGTTGTCCTAGTCCAAATTGTGAATCCTGCAAGGGGCTCAGGGAAAGACGTTCAGGAAGCTAAGAAGGAGACATACCTAATTGCACAAAGGATTAATGACATTTATGGCTCTCACGATTATCAGCCTGTTATTCTTATTGATCGCCCAGTTCCTCGTTTTGAAAAGAGTGCTTATTATGCCGTTGCAGAATGCTGTATAGTCAATGCAGTGAGGGATGGTATGAACTTAGTCCCTTACAAGTATATTGTCTGCAGACAGGGAACTCGTCAATTGGATGAAGCTTTGGACAGGAAACATGGTACTCCACACACAAGTATGCTTGTTGTTTCTGAATTTATTGGTTGTTCACCATCCTTAAGTGGAGCCATCAGGGTGAACCCTTGGGATGTAGATGCTGTCGCTGATGCTTTGAATCTGGCAATTACCATGCGAGATGCAGAGAAGCAATTGCGGCATGAGAAACATTATCGCTATGTAAGTTCTCATGACATAGCCTACTGGGCACGCAGTTTTGTGCAGGATCTTGAGAGAGCCTGCGAAGATCATTATACTAAGCGGTACTGGGGAATTGGTCTTGGTCTTGGATTCAGACTTGTGTCACTATCTCCCGGTTTCAGGAGGTTGAATATTGAGCACATCGCATCAGCATATAAAAGGGCAAGTAGAAGAGCCATATTTTTGGATTATGATGGCACTGTTGTTCCTCAGTCGTCAATTGTTAAAAACCCCAGTTCTGAAGTTATATCTATTTTGAATACTCTGAGTAATGACTCAAAGAACACAGTGTTTATTGTCAGTGGAAGGGGGAGGGATTCTCTGAGTGAGTGGTTCGCTTCATGCAAGATGCTTGGAATAGCAGCTGAACACGGGTATTTCTTAAGGTGGAACAGAGACTCAGAGTGGGAAATTAGCCCAAAATGTGCTGATCTTGACTGGAAGAAAATGGCCGAACCTGTCATGAAATTGTATACAGAGGCAACAGATGGTTCAAATATTGAGGTGAAAGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGATCCTGATTTTGGTTCTTGCCAAGCCAAAGAGTTGTTGGATCACTTAGAAAGTGTGCTTGCCAATGAACCGGCAGTTGTTACGAGAGGGCAGCATATAGTGGAAGCCAAACCACAGGGAGTCAGCAAGGGATTGGTCGCTGAAAAAATTCTTCAAACTTTGGTCAATAATGGCAATCCACCTGATTTTGTGACATGCATTGGGGACGATAGATCTGATGAAGACATGTTTGAGAGCATATTAAGGACGGTATCATCATGTCCTTCACCACCTGTGTCTCCCCAGATCTTTGCTTGCACTGTTGGAAGAAAGCCAAGCAAGGCCAAGTATTATCTTGATGACGCTGCAGACGTTTTACGACTCCTGCAGGGCCTTGCCACTGCATCAAACCCGAAGCCTAGACAACTATCTCAAATCCAGGTCTCATTTGAGAGCGCTTTTTGA 2562 0.4239 MASASCVNLLELATPRALPRVMTVPGIISNMDGFSSNDGDSDVSSSGCRERKIIVANMLPIHAKRDPETSKWCFSFDEDSILVQLRDGFSSETEVIYVGSLKVEVDADEQEEIAQKLLEEFNCVPTFLPYELQRRFYIGFCKQQLWPLFHYMLPMCPDHSDRFDRLLWQAYVSANKIFADRVMEIINPEEDYVWVHDYHLMLFPTFLRKRYNGVKVGFFLHSPFPSSEIYRTLPVRDEIMRGLLNADLIGFHTFDYARHFLSCCSRMLGLDYKSKRGHIGLDYFGRTVYVKILPVGVHMGRLESVLNLPSTAAKVKDILEELKGRKVILGVDDMDIFKGISLKLLAVEQLLQQHPDLQGKVVLVQIVNPARGSGKDVQEAKKETYLIAQRINDIYGSHDYQPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTRQLDEALDRKHGTPHTSMLVVSEFIGCSPSLSGAIRVNPWDVDAVADALNLAITMRDAEKQLRHEKHYRYVSSHDIAYWARSFVQDLERACEDHYTKRYWGIGLGLGFRLVSLSPGFRRLNIEHIASAYKRASRRAIFLDYDGTVVPQSSIVKNPSSEVISILNTLSNDSKNTVFIVSGRGRDSLSEWFASCKMLGIAAEHGYFLRWNRDSEWEISPKCADLDWKKMAEPVMKLYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVTRGQHIVEAKPQGVSKGLVAEKILQTLVNNGNPPDFVTCIGDDRSDEDMFESILRTVSSCPSPPVSPQIFACTVGRKPSKAKYYLDDAADVLRLLQGLATASNPKPRQLSQIQVSFESAF* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01217 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 19 833 IPR001830 GO:0003824|GO:0005992
Pte11g01217 853 NCBIfam HAD-IIB family hydrolase 584 786 IPR006379 -
Pte11g01217 853 Pfam Trehalose-phosphatase 586 820 IPR003337 GO:0003824|GO:0005992
Pte11g01217 853 FunFam Trehalose-6-phosphate synthase 2 666 745 - -
Pte11g01217 853 Gene3D Glycogen Phosphorylase B; 45 303 - -
Pte11g01217 853 Gene3D Glycogen Phosphorylase B; 304 520 - -
Pte11g01217 853 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 712 844 - -
Pte11g01217 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 582 699 - -
Pte11g01217 853 NCBIfam trehalose-phosphatase 580 832 IPR003337 GO:0003824|GO:0005992
Pte11g01217 853 Pfam Glycosyltransferase family 20 51 536 IPR001830 GO:0003824|GO:0005992
Pte11g01217 853 SUPERFAMILY HAD-like 583 832 IPR036412 -
Pte11g01217 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 44 303 - -
Pte11g01217 853 CDD GT20_TPS 51 536 IPR001830 GO:0003824|GO:0005992
Pte11g01217 853 CDD HAD_TPP 584 826 - -
Pte11g01217 853 FunFam Alpha,alpha-trehalose-phosphate synthase 305 520 - -
Pte11g01217 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 51 540 - -
Pte11g01217 853 Gene3D - 582 698 IPR023214 -
Pte11g01217 853 Gene3D - 712 844 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01217 Pte-Chr11 30376244 30379313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01217 1 854 Trehalose Biosynthesis Gene Families AT1G60140 71.842 0.0 1321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01217 K16055 - gmx:100775779 1445.25