Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01199 ATGTACTTGAGAAGAATAAAGTCCAGAGATCGAAGATGGGGTTCAGTATGCCAGCCACTGGAGTATTTTATTAGATCTAACAGCAATACTACTTGCCCTCAATCTTTGGGCTCGAAGCCTATCCTAAGGGAGCATTCTTCCGGAACTAGCATCATCAAAAGACATTTGCTCGATTCATTTTCAGCTCAAAGTGCCAATTCTAGAAGTTCTTATTTAAGTTTTCTTGCAAGGCCGAGTTCATGTTGGATAAATACTCAATTTTGTGCATATAGTTCTGAAGGGGATGGAAGAAATGCAAGTGAGAACAAACATTTGCCTGAAACTAGTGGAACTAACTTTGATAAGCAAAAGAAAAGGTGGGAGAAGGTTGGGGAAAATAGCAAGCACAGTGATGCACATTCAAAACTTGGTGAACAAGATCAGAAGGAATGGCTTGAGAATGAGAAGCTTGCTATTGAAAGTAGAAGGAGAGAATCTCCTTTTCTAACTCGAAGAGACAAGTTCAAGAATGAGTTTCTAAGGAGGATCTTACCATGGGAGAAAATAAACATTGCATGGGACACATTTCCTTACTACATCCGTGAGCACACCAAGAACATCCTCAAGGAATGTGCTGCCTCCCATTTAAAAAATAATAAGTTGACTAAATCTTATGGTGCTTGTTTGACGTCCTCCAGTGGGAGAATACTGCTTCAAAGTGTCCCTGGCACTGAGCTATATCGGGAGCGGTTGGTGAAGGCCCTTGCACGAGAACTAAAAGTCCCTCTTCTAGTGCTTGACGGCAGCACTCTTGCACCTTATGATTTTAGTGATGACATGTTATCAGAAAATGAATCAGATGATGAAAATGGTGAATCTGAGGATGATGACAGCGTGGAGTCTGAGGAGGACGATGATAATGATGCTAGTAATGTGGAAGAATGGAATAGTAGCGGTGACGTTAAGTCAGAATGTAGTGACAATGATGAAGTTGATGTTCATACAGCTGCTGAAGTAGCGCTTAAGAAGCTTGTTCCTTATAACCTTGAAGATTTGGCAAAGGGAGCTCCTGTTGAGTCTGAGTCTGACTCATCAAAGTCTGAGAATGCTGAGCATTCTGACAAGTGCAAACGCCCCTTGAAGAAAGGTGATAGGGTGAGATATGTTGGTCCTTCTGTTCGTGTTGAAGCTGATAACAGGGTCATATTGGGGAAGATACTGACATCTGATGGTCCAACAAATGCTTATACTATTATTCGTGGAAGGGCTTTGTCAAATGGACAACGTGGAGAAATATATGAAGTGAATGAAGATAGAGCTGCTGTTATTTTGGATATTTGTGAAAAAGAAAGAGGTGAAGGAGAGGAGAAGAACGACAGTGAAGAAAACCGAAAACCACCGGTTTACTGGATGCATGTTAAAGACATTGAGCATGATCAGGATACCGAGGCAGAAGATTGTTACATAGCAATGGAGGCTCTTTGGGAGGTCTTGCATTCCAAGCAACCTCTTATTGTTTATTTCCCAGACAGTTCACAGTGGTTGTCTAGGGCAGTCCGTAAGTCAAATCGTAAGGAATTTGTTAACAAGGTGCAAGAGATGTTTGACCAGTTGTCTGGTCCAGTAGTTTTGATTTGTGGGCAAAACAGAGTGGAATCTGGATCAAAGGAGAAAGAGAAGTTTACAATGATACTACCAAATATTGGGAGGCTTGCTAAGCTGCCTCTTCCTCTTAAGCGTCTGACTGAGGGGCTTCAAGGGACCAAAAGATCTAATGATGATGAGATTTTCAAGCTTTTCGACAATGTTTTGCCTCTGCACCCTCCAAAGGGGGAAGATGTACTCAGAACTTTCAACAAACAGGTTGAGGAAGACAGGAAAATTGTCATCTCGCGTAGTAATTTAAATGAATTGCACAGGGTTCTCGAAGAACATGGGTTATCGTGCACTGATCTCTTGCATATAGATACTAATGATGTACTCCTGACGAAACGAAAAGCGGAGAAAGTTGTTGGTTGGGCCAAAAACCATTATTTGTCGTCTTGCCTAGTTCCGACCATAAGAAATGAGAAGTTGTGTATTCCTCGTGAAAGTCTTGAAGTTGCAATTTTGCGGTTGAAAGAGCAAGATGATGTGTCCAAAAAGCCCTCGCAGAGTCTGAAGAATCTTGCAAAGGATGAATACGAAACCAATTTTGTTTCAGCTGTTGTGCCTCCCGGTGAAATTGGCGTTAGATTTGACGATGTAGGTGCTCTTGAAGATGTAAAGAAAGCACTGAATGAACTAGTTATCCTTCCCATGAGAAGACCAGAACTTTTTTCTCGAGGAAACTTGTTGCAGCCCTGCAAAGGAATTTTACTCTTCGGTCCTCCTGGAACTGGAAAAACACTCCTTGCAAAGGCACTTGCAACTGAAGCTGGAGCAAATTTTATTAGTATAACTGGTTCAACACTTACATCTAAGTGGTTTGGAGATGCTGAGAAACTTACGAAGGCTCTTTTCTCCTTCGCCAGTAAGCTAGCTCCTGTTATCATTTTTGTTGATGAGGTTGATAGTTTACTCGGTGCCCGTGGTGGTGGTTTTGAACATGAAGCTACAAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGGTTAAGGTCAAAAGAGAGCGAAAGAATCCTTATTCTCGGTGCAACAAATAGGCCCTTTGACCTTGATGACGCTGTCATTCGTCGTTTACCAAGGAGGATATATGTGGATTTGCCGGATTCTGAAAACCGCCTGAAGATTTTGAGAATAATTCTTGCTAAGGAATATTTAGAACCTAACTTCCAGTTTGAAAAGCTGGCTAGCTTGACCGAGGGATACTCTGGCAGCGATCTGAAGAACCTTTGCATCGCTGCAGCATATAGACCTGTGCAAGAACTTATAGAGGAAGAAACGAAGGGGATGGAGGGTGATGGAACTACAGTGTTGAGACCACTTAACTTGGATGATTTTGTTCATTCAAAATCCAAGGTCGGACCATCAGTTGCATATGATGCTGCTAGCATGAATGAATTAAGGAAATGGAATGAACAATACGGAGAAGGAGGAAGTAGGAGAAAATCACCGTTTGGATTTGGGAACTGA 3096 0.4199 MYLRRIKSRDRRWGSVCQPLEYFIRSNSNTTCPQSLGSKPILREHSSGTSIIKRHLLDSFSAQSANSRSSYLSFLARPSSCWINTQFCAYSSEGDGRNASENKHLPETSGTNFDKQKKRWEKVGENSKHSDAHSKLGEQDQKEWLENEKLAIESRRRESPFLTRRDKFKNEFLRRILPWEKINIAWDTFPYYIREHTKNILKECAASHLKNNKLTKSYGACLTSSSGRILLQSVPGTELYRERLVKALARELKVPLLVLDGSTLAPYDFSDDMLSENESDDENGESEDDDSVESEEDDDNDASNVEEWNSSGDVKSECSDNDEVDVHTAAEVALKKLVPYNLEDLAKGAPVESESDSSKSENAEHSDKCKRPLKKGDRVRYVGPSVRVEADNRVILGKILTSDGPTNAYTIIRGRALSNGQRGEIYEVNEDRAAVILDICEKERGEGEEKNDSEENRKPPVYWMHVKDIEHDQDTEAEDCYIAMEALWEVLHSKQPLIVYFPDSSQWLSRAVRKSNRKEFVNKVQEMFDQLSGPVVLICGQNRVESGSKEKEKFTMILPNIGRLAKLPLPLKRLTEGLQGTKRSNDDEIFKLFDNVLPLHPPKGEDVLRTFNKQVEEDRKIVISRSNLNELHRVLEEHGLSCTDLLHIDTNDVLLTKRKAEKVVGWAKNHYLSSCLVPTIRNEKLCIPRESLEVAILRLKEQDDVSKKPSQSLKNLAKDEYETNFVSAVVPPGEIGVRFDDVGALEDVKKALNELVILPMRRPELFSRGNLLQPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGGFEHEATRRMRNEFMAAWDGLRSKESERILILGATNRPFDLDDAVIRRLPRRIYVDLPDSENRLKILRIILAKEYLEPNFQFEKLASLTEGYSGSDLKNLCIAAAYRPVQELIEEETKGMEGDGTTVLRPLNLDDFVHSKSKVGPSVAYDAASMNELRKWNEQYGEGGSRRKSPFGFGN* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01199 1031 MobiDBLite consensus disorder prediction 348 375 - -
Pte11g01199 1031 SMART AAA_5 774 911 IPR003593 GO:0016887
Pte11g01199 1031 ProSitePatterns AAA-protein family signature. 881 900 IPR003960 GO:0005524|GO:0016887
Pte11g01199 1031 MobiDBLite consensus disorder prediction 273 304 - -
Pte11g01199 1031 Pfam AAA+ lid domain 932 967 IPR041569 -
Pte11g01199 1031 Pfam ATPase family associated with various cellular activities (AAA) 778 908 IPR003959 GO:0005524|GO:0016887
Pte11g01199 1031 Gene3D - 737 1013 IPR027417 -
Pte11g01199 1031 MobiDBLite consensus disorder prediction 95 139 - -
Pte11g01199 1031 Gene3D - 910 995 - -
Pte11g01199 1031 MobiDBLite consensus disorder prediction 97 139 - -
Pte11g01199 1031 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 167 1024 - -
Pte11g01199 1031 MobiDBLite consensus disorder prediction 269 323 - -
Pte11g01199 1031 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 736 912 - -
Pte11g01199 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 737 958 IPR027417 -
Pte11g01199 1031 MobiDBLite consensus disorder prediction 357 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01199 Pte-Chr11 30170456 30183103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01199 737 972 Calmodulin-binding Proteins AT3G56690 38.494 7.37e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01199 - - qlo:115981875 1476.07