Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01193 ATGGCTTTGTCTTCATTGCATCTTCTAGTGCTTCTTCTGTTTGCTGTTGTCTCAGCAAGAGAGGCTTTAGGTGTGTCAGTCAAGCCAGTGAGTCATCTCAGCAATGAAATATTAGCACAGCAAAGAGCAGACAGAGTGGAGAGACTTCCAGGGCAGCCTGACGTGAAGTTCAAGCAATATGCAGGCTATGTAACAGTCAATGAAACTCATGGAAGAGCACTGTTCTATTGGTTCTTTGAATCTACAGAAAATCCAGAACAAAAGCCTGTGCTCCTCTGGCTCAATGGAGGTCCTGGATGCTCTTCTATTGGTTATGGACAGTCAGAGGAACTTGGACCATTCTTCCCACAGAACAGCACCACACCAAAGTTAAAGTTGAATCCCTTTGCTTGGAATAGAGAGGCAAATCTATTATTTGTGGAATCTCCCGTTGGAGTTGGATTCTCCTACACAAACACAAGCAGCGATATTGATGAACTTGGTGACACAATTACTGCCAAGGATTCACACACTTTCCTGGTGAACTGGTTCAATCGGTTCCCACAGTTTCAGTCTCATGAATTCTACATTGCTGGTGAAAGCTATGCAGGACATTATGTTCCACAACTTTCGGAACTCGTTTTCGATAATAATCAAAAGGCTCAAAAGGAAGATTATATAAACCTCAAGGGATTTATGATAGGAAATGCACTGATGGATGATGAAACGGACCAGAAAGGAATGATAGACTATGCTTGGGATCATGCAGTCATGTCTGACAAATTGTACCAAGATATCAAAACAAAATGCAATTTCAGCAATTCAAATCTATCCAATGATTGCAACATAACACTGAACAAGTATTTTGATTTGTACAAGCTTATTGACATGTACAGCTTGTACAGCCCCACTTGTCTCGCAGATAACAACACCAAAGCACTCCCTGCCATCAAACGCGTTGCTCCACATCTGTTCTCCAAATTTAGATCTTGGAATCAAAAGCCGGCAGGTTATGACCCATGCGCATCAAATTATACCGAAGCTTACTTTAATAGGCCTGAAGTTCAAAAGGCACTACATGCCAATATCACCAGAATTCCATATCCATGGACACATTGCAGCAACAACATTACATTTTGGAAAGAATCACCATCATCAGTACTTCCTGTAATAAAGAAGCTTGTTGCAGGGGGTTTGCGGATATGGGTTTATAGTGGAGATACAGATGGAAGAATTCCAGTGACTGCAACAAGATACACATTGAGAAAACTTGGTCTAAAAATTGTAGAAGATTGGACTCCTTGGTACAACAAGAAACAGGTAGGAGGATGGACAATTGCATATGATGGGCTTACTTTTGCAACCATTAGAGGTGCTGGTCATCAGGTTCCAACTTTTGCTCCAAGGCAAGCCCTGGAATTGGTTAAGCATTTCCTAGCTAACAAAAAGTTGCCCAATGCAGCATTTTGA 1449 0.4155 MALSSLHLLVLLLFAVVSAREALGVSVKPVSHLSNEILAQQRADRVERLPGQPDVKFKQYAGYVTVNETHGRALFYWFFESTENPEQKPVLLWLNGGPGCSSIGYGQSEELGPFFPQNSTTPKLKLNPFAWNREANLLFVESPVGVGFSYTNTSSDIDELGDTITAKDSHTFLVNWFNRFPQFQSHEFYIAGESYAGHYVPQLSELVFDNNQKAQKEDYINLKGFMIGNALMDDETDQKGMIDYAWDHAVMSDKLYQDIKTKCNFSNSNLSNDCNITLNKYFDLYKLIDMYSLYSPTCLADNNTKALPAIKRVAPHLFSKFRSWNQKPAGYDPCASNYTEAYFNRPEVQKALHANITRIPYPWTHCSNNITFWKESPSSVLPVIKKLVAGGLRIWVYSGDTDGRIPVTATRYTLRKLGLKIVEDWTPWYNKKQVGGWTIAYDGLTFATIRGAGHQVPTFAPRQALELVKHFLANKKLPNAAF* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01193 482 SUPERFAMILY alpha/beta-Hydrolases 42 479 IPR029058 -
Pte11g01193 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Pte11g01193 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Pte11g01193 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Pte11g01193 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Pte11g01193 482 Pfam Serine carboxypeptidase 51 474 IPR001563 GO:0004185|GO:0006508
Pte11g01193 482 ProSitePatterns Serine carboxypeptidases, histidine active site. 444 461 IPR033124 GO:0004185
Pte11g01193 482 Gene3D - 380 473 - -
Pte11g01193 482 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Pte11g01193 482 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 461 IPR001563 GO:0004185|GO:0006508
Pte11g01193 482 FunFam Carboxypeptidase 380 474 - -
Pte11g01193 482 Gene3D - 334 371 - -
Pte11g01193 482 Gene3D alpha/beta hydrolase 41 300 IPR029058 -
Pte11g01193 482 FunFam Carboxypeptidase 40 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01193 Pte-Chr11 30095403 30101833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01193 344 477 Calmodulin-binding Proteins AT2G22960 31.111 6.24e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01193 K16297 - qsa:O6P43_026122 774.237