Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01179 ATGGGTTCGAAAGGGTGGTCAGAGATGGCTCGGGATGGACATGTTGTCCCTGTAGATGGACAGGGCGGGTTGGCCCCGAAGAAGACACAGTCCTCCAGGAGTTGGGTACTTATGGATTCTACAGGGCAGGCTACTGTGCTTGATGTTGACAAGTATGCAATTATGCATCGGGTTCAGATTCATGCTCGTGATCTTAGGATTCTTGATCCTTTGTTGTCGTACCCCTCTACCATTCTGGGTCGAGAGAAGGCTATTGTTCTTAGCTTGGAGCACATCAAGGCAATTATCACTTCTGAGGAGGTTTTGCTTCGAGATCCAACCGATGAGAATGTTATCCCTGTTGTTGAGGAACTTCAAAGGCGATTGCCTCCTTCAAATGTATCACGCGAAAATCAAGAAGGCAAGGAGTACCCAGGTGGTCAAAATGATGTTGAAGCAACAGAAGAAGATGAGTCACCATTTGAATTTCGTGCCCTGGAGGTAGCACTGGAAGCAATTTGTAGTTATCTTGCTGCACGCACATCAGAATTGGAGACTGCTGCATATCCTGCTTTAGATGAGCTCACATCCAAGATCAGTAGTCGAAACTTGGACAGAGTACGTAAACTAAAGAGTGCCATGACTAGACTGACTGCTCGTGTTCAAAAGGTTAGAGATGAACTTGAGCAACTATTGGATGATGATGATGATATGGCTGACCTATATTTGTCAAGAAAATTGGCAGGATCATCATCCTCACCAATAAGTGGCTCAGGTGCTGCCAACTGGTTTCCGACATCCCCAACCATAGGCTCCAGGATATCTAAAGCAAGTAGGGCGAGTATGGCAACGATTCGTGCAGATGAAAATGATGTGGAGGATCTTGAAATGTTACTTGAGGCTTATTTTATGCAAATCGATGGAACATTGAACAAATTAACCACGCTAAGGGAATATATTGATGACACGGAAGATTATATCAATATCCAGCTTGACAATCATCGAAACCAGTTGATTCAGTTGGAGCTCTTTCTCAGTTCCGGAACAGTTTGTGTCTCTATCTACTCTCTAGTGGCTGCTATATTTGGTATGAATATTCCATACACTTGGAACGATGATCACAGCTATGTGTTCCAATGGGTTGTCATTATCTCAGGCATATTTTCTGCCGTTTTGTTCATTGTTATCATGACCTATGCTCGCTTCAAAGGGTTAGTTGGATCCTGA 1206 0.4395 MGSKGWSEMARDGHVVPVDGQGGLAPKKTQSSRSWVLMDSTGQATVLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLSLEHIKAIITSEEVLLRDPTDENVIPVVEELQRRLPPSNVSRENQEGKEYPGGQNDVEATEEDESPFEFRALEVALEAICSYLAARTSELETAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLAGSSSSPISGSGAANWFPTSPTIGSRISKASRASMATIRADENDVEDLEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCVSIYSLVAAIFGMNIPYTWNDDHSYVFQWVVIISGIFSAVLFIVIMTYARFKGLVGS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01179 401 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 25 399 IPR039204 -
Pte11g01179 401 CDD Mrs2_Mfm1p-like 35 398 IPR039204 -
Pte11g01179 401 Pfam CorA-like Mg2+ transporter protein 269 389 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pte11g01179 401 MobiDBLite consensus disorder prediction 122 148 - -
Pte11g01179 401 Coils Coil 200 227 - -
Pte11g01179 401 MobiDBLite consensus disorder prediction 1 29 - -
Pte11g01179 401 Gene3D Magnesium transport protein CorA, transmembrane region 113 331 - -
Pte11g01179 401 FunFam Magnesium transporter MRS2-1 24 106 - -
Pte11g01179 401 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 337 389 IPR045863 -
Pte11g01179 401 Gene3D - 24 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01179 Pte-Chr11 29968783 29974061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01179 9 374 MRS2 Gene Family AT5G64560 78.804 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01179 K16075 - qsa:O6P43_021490 633.639