Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01178 ATGTCCCAGAAATTGGTGGTCCCCCCCGTATTGCATTCCATCAAATCATTACCATCTGATTATAAAGCTTTGGGTCTTCACAATTATGATCGATTTGAAAAGAGAAAAGAGCTGGAATCGGGAAGGAGAGATGCAATGGAGTTAACTATTCCTGAGAATGGCTCTCTGACAGAGGAGCGAGCTATGGATTCTCAGGACACCGTTAGTGACATTTATCCAGTTCACGAGGACTCGCCATATGGTGGGAAAATAGTATCAACTGATAGAATATCAATTGGTGATGAAGACTTAGATTCTGTTGCTTTGACCTCGCCATCCGCATCAGGAGTTCAGACTGAACGTCGCTGGAGCGATACTACATTGTATGCTGGAAAAAAGAAGCTTAAATCATGGTTTCAACTCCCTAATGGGAATTGGGAGCTGGGGAAGATATTGTCATCATCGAATAATGAATCTGTAATTTCACTGCCCGATGGGAAGGTTTTGAAAGTTAATGCTGAAAGTTTGTTACCGGGAAATCCTGATATTCTTGACGGAGTTGATGATCTCATGCAACTTAGTTATTTGAATGAACCATCGGTTTTGTATAATCTTCAATACCGATACAATCAAGATATGATTTATACTAAGGCAGGGCCTGTTTTAGTTGCTGTAAATCCCTTCAAGAAAGTTCCCCTCTATGGTAATGATTACATTGAAGCATACAAGCACAAATCAATTGAGAGTCCACATGTGTATGCCATTACGGACACAGCCATGCGGGAAATGAGGCGAGGTAACCTTCCCATTCTCTGGAATTCTTGTAATTATCGTCTTCTTTTGTTCAGTGGTGAAAGTGGAGCAGGAAAAACTGAGACCGCAAAGATAGCAATGCAGTATTTAGCTACCCTAGGTGGTGGAACTGGCATTGAATATGAGATATTAAAGACAAATCCAATACTAGAAGCCTTTGGAAATGCAAAAACATTAAGAAATGACAATTCAAGTCGTTTTGGGAAGCTCATTGAGATTCATTTTAGTGAAACTGGAAAAATAGCAGGTGCTAATATTCAAACATTTTTGCTGGAAAAGTCTAGAGTGGTCCAATGCAATGAGGGGGAAAGGTCTTATCATATATTTTATCAGCTCTGTGCTGGGGCAACGCCTTCACTCAGAGAGAAGCTAATCCTAAAAGGTGTAGATGAGTACAACTATTTGAAGCAAAGTAATTGTTATTCGATTGGTGGAGTTGATGATGCACAACAATTTCGTATAGTCATGGAAGCATTGGATGTTGTTCACATCAGCGAGCAAGATCAAGAGAGTTTATTTGCAATGGTTTCTGCGATATTGTGGATAGGAGACATTTCATTCAACGTAATTGATAATGAAAACCATGTTGAAGCTGCAGCAGATGATGCTCTCCACAATGTTGCCAAACTGATGGGATGCGATGATGAGGAACTTAAGCTTGCATTGTCAACTCGTAAAATGAAAGTTGGTAATGATAACATTGTCCAGAAGCTAACACTAGCTCAGGCAATTGATGCCAGAGATGCTTTGGCAAAATCAATTTATGCTTGTTTATTTGAGTGGCTGGTTGAGCAGATAAACAAGTCACTTGCAGTTGGCAAACGGCGTACCGGTAGATCAATCAGTATACTGGATATCTATGGCTTTGAATCATTTGATAGGAACAGCTTTGAGCAGTTTTGCATAAATTATGCAAATGAGAGATTGCAGCAACACTTCAACCGCCATTTGTTCAAACTTGAACAGGAGGAATATGTACAAGATGGTATTGACTGGGCAAAAGTTGACTTTGAAGATAACCAAGACTGTCTTTGTCTATTTGAAAAGAAACCACTGGGATTACTATCTCTATTGGATGAGGAATCCACGTTCCCAAATGGTACAGATATGACATTCGCCCACAAGCTTAAGCAGCATTTGAGTTCCAACTCTTGCTTCAGAGGAGAAAGAGGCAAAGCATTTTCTGTTAACCATTATGCCGGGGAGGTCACATATGATACGACTGGATTTCTGGAGAAGAATAGGGACCTACTGCACTTGGATTCCATTCAACTGTTATCTTCTTGCTCCTGCCGTCTTCTTCAGATCTTTGCATCCCGTATGTTGACTCAATCTGAGAAACCTGTGGTTGGTCCTCTGCATAAGTCGGGTGGAGCAGATTCTCAAAAGTTAAGTGTGGCTACCAAATTCAAGGGTCAATTGTTCAAACTGATGCAACGCTTGGAGAGCACTACACCTCATTTCATTCGCTGTATCAAGCCTAACAACCTTCAATCTCCGGGATTGTATGAGCAGCGCCTTGTGCTGCAGCAGCTACGATGTTGCGGAGTTCTGGAGGTGGTTAGAATATCAAGATCAGGGTTTCCTACTAGAATGACTCATCAAAAATTTGCCAGAAGATATGGATTTCTTCTTCTTGAAGATGCGGCATCACAGGATCCACTTAGTGTATCAGTTGCAATTCTCCACCAGTTCAATATTTTACCAGACTTGTATCAAGTTGGTTACACAAAATTGTTTTTCCGAACAGGACAGGTAAATTACTCTCATGGTTGA 2568 0.4073 MSQKLVVPPVLHSIKSLPSDYKALGLHNYDRFEKRKELESGRRDAMELTIPENGSLTEERAMDSQDTVSDIYPVHEDSPYGGKIVSTDRISIGDEDLDSVALTSPSASGVQTERRWSDTTLYAGKKKLKSWFQLPNGNWELGKILSSSNNESVISLPDGKVLKVNAESLLPGNPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQDMIYTKAGPVLVAVNPFKKVPLYGNDYIEAYKHKSIESPHVYAITDTAMREMRRGNLPILWNSCNYRLLLFSGESGAGKTETAKIAMQYLATLGGGTGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKIAGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGATPSLREKLILKGVDEYNYLKQSNCYSIGGVDDAQQFRIVMEALDVVHISEQDQESLFAMVSAILWIGDISFNVIDNENHVEAAADDALHNVAKLMGCDDEELKLALSTRKMKVGNDNIVQKLTLAQAIDARDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYVQDGIDWAKVDFEDNQDCLCLFEKKPLGLLSLLDEESTFPNGTDMTFAHKLKQHLSSNSCFRGERGKAFSVNHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCRLLQIFASRMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFKLMQRLESTTPHFIRCIKPNNLQSPGLYEQRLVLQQLRCCGVLEVVRISRSGFPTRMTHQKFARRYGFLLLEDAASQDPLSVSVAILHQFNILPDLYQVGYTKLFFRTGQVNYSHG* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01178 855 Gene3D Kinesin motor domain 177 791 IPR036961 -
Pte11g01178 855 FunFam Unconventional myosin-XIX 556 748 - -
Pte11g01178 855 CDD MYSc_Myo8 192 846 IPR036022 -
Pte11g01178 855 FunFam Myosin heavy chain 368 424 - -
Pte11g01178 855 Gene3D - 368 424 - -
Pte11g01178 855 Gene3D - 792 852 - -
Pte11g01178 855 Gene3D - 556 748 - -
Pte11g01178 855 SMART MYSc_2a 172 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01178 855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 852 IPR027417 -
Pte11g01178 855 Pfam Myosin head (motor domain) 180 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01178 855 PRINTS Myosin heavy chain signature 597 625 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01178 855 PRINTS Myosin heavy chain signature 544 572 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01178 855 PRINTS Myosin heavy chain signature 312 339 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01178 855 PRINTS Myosin heavy chain signature 270 295 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01178 855 PRINTS Myosin heavy chain signature 208 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01178 855 Gene3D Myosin VI head, motor domain, U50 subdomain 425 533 - -
Pte11g01178 855 ProSiteProfiles Myosin motor domain profile. 178 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte11g01178 855 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 125 174 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte11g01178 855 PANTHER MYOSIN 173 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01178 Pte-Chr11 29924734 29934998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01178 7 850 Myosins gene family AT1G50360 74.083 0.0 1291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01178 - - qsa:O6P43_032275 1338.55