Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01176 ATGAACGACGCCGATGTCTCCAAGCAGATCCAGCAGATGGTGAGGTTTATTCACCAAGAAGCCGAGGAAAAAGCAAATGAAATCCGTGTATCGGCTGAAGAGGAGTTTAACATCGAGAAGTTGCAGTTGCTTGAAGCCGAGAAGAAGAAGATCAGGCAAGAGTATGAGCGCAAAGAGAAGCAAGTTGAAGTTCGAAGGAAAATTGAGTACTCTATGCAGCTCAACGCTTCTCGGATTAAAGTGCTTCAAGCTCAAGATGATCTCGTAAATGCTATGAAACAGGCTGCTGCAAAGGAGCTCTTGAAAGTTAGCCACCATCACCATACCTATAAGGAACTTCTGAAAGATCTAATAGTCCAGAGTTTGCTTAGACTGAAGGAGCCTTCTGTCTTATTGCGTTGTCGGAAGCATGATTTGCATTTAGTGGAGTCTGTGCTGGAAAAAGCCGCAGAGGAGTATGCTGACAAAGCACAAGTTCATGCACCAGAGATCATTGTTGACAAACATATTCATCTTCCACCTGAACCTGAGCATCACCTTTTGGACATTTTCCACCATCACCACGAGAATGGTCCATTCTGCTCTGGGGGTGTAGTTTTAGCATCTAAAGATGGGAAGATTGTTTTTGAGAACACCCTGGACGCACGGCTTGATGTTGTTTTCCGAAAAAAGCTTCCAGAGATCCGCAAGTGGCTGTTTGGTCAGGTTGTTGCCTGA 717 0.4491 MNDADVSKQIQQMVRFIHQEAEEKANEIRVSAEEEFNIEKLQLLEAEKKKIRQEYERKEKQVEVRRKIEYSMQLNASRIKVLQAQDDLVNAMKQAAAKELLKVSHHHHTYKELLKDLIVQSLLRLKEPSVLLRCRKHDLHLVESVLEKAAEEYADKAQVHAPEIIVDKHIHLPPEPEHHLLDIFHHHHENGPFCSGGVVLASKDGKIVFENTLDARLDVVFRKKLPEIRKWLFGQVVA* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01176 238 Pfam ATP synthase (E/31 kDa) subunit 16 233 IPR002842 GO:0033178|GO:0046961|GO:1902600
Pte11g01176 238 SUPERFAMILY V-type ATPase subunit E-like 87 234 - -
Pte11g01176 238 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
Pte11g01176 238 Gene3D - 1 62 - -
Pte11g01176 238 Coils Coil 29 61 - -
Pte11g01176 238 Hamap V-type proton ATPase subunit E [atpE]. 8 234 IPR002842 GO:0033178|GO:0046961|GO:1902600
Pte11g01176 238 Gene3D - 92 236 IPR038495 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01176 Pte-Chr11 29895337 29898234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01176 1 239 Primary Pumps ATPases(2) AT4G11150 74.477 3.99e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01176 K02150 - vvi:100246834 368.622