Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01169 ATGAATGTGGAGGAAGGGGTTAGTGGTTCTGGGTGGAGCAGAGAACAAGACAAAGCATTTGAAAATGCTCTAGCAACTTATCCTGAGGATTGTTCAGATCGATGGGAGAAGATTGCCGGTGAAGTTGAAGGCAAAAGTTTAGAGGAGATTAAGTATCACTATGAGCTTTTAGTTGATGATGTAACCAGTATTGAATCTGGTTGTGTATCATTGCCCTCCTATAATTGTTTAGAGGGTTCAACCAGCAATGCTGGTGAGGAAGGAACTAGTAAGAGGGGAAATCATGGGGGACACTACACTGGCGAGTCTAATCATGGAAGCAAGGCTTCCCGGTCAGATCAGGAACGGCGAAAGGGAATTGCTTGGACAGAGGATGAGCACAGGTTATTTCTTCTTGGGTTGGAGAAATATGGAAAAGGAGACTGGAGAAGCATATCTAGGAACTTCGTTGTGACTAGAACCCCCACACAGGTCGCAAGTCATGCCCAGAAATACTTCATCCGTTTGAATTCAATGAACAAAGACAGGAGGAGATCCAGTATTCATGATATTACAAGTGTGAACAACGGAGACATTTTGGCTCCTCAAGGACCGATCACTGGCCACACAAACGGATCTGCAGGAGTTTCTGCTGGAAAATCAACCAAACAAAACCCTCAAACTCCAGCAGGCCCTCCAGCTCCAGGCGTGGGAATATACGGTACTGCTCCAACTATAGGCCAACCAATTGGAGGACCTCTTGTATCTGCTGTTGGCACACCAGTAAATCTTGCTGCTCCACCACACATGGCGTATGGGGTAAGAGCACCTGTACCTGGAGGTGTTGTTCCTGGTGCTCCAATGAACATGGGTCCAATGGTATACCCAATGCCACACACATCAGCCCATAGGACTACACCCCTGCTCAGTAGAAGCAGTACAATACAGCCACACAGGAAGACGATTGAGACTATTGGCAGATTCTGGAGGAGTATTACCAGTCTCCTAGGACAGCTACTAATGACAGGTGACAGGAAATTCCAAATTCTTCCAGAAGAGCGAGGTGGGAGCTTGGTTACAGTTAGCAGTGATTGGTGTGTCACAATCATTCTTGGGTGTGTGTGA 1104 0.4674 MNVEEGVSGSGWSREQDKAFENALATYPEDCSDRWEKIAGEVEGKSLEEIKYHYELLVDDVTSIESGCVSLPSYNCLEGSTSNAGEEGTSKRGNHGGHYTGESNHGSKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDILAPQGPITGHTNGSAGVSAGKSTKQNPQTPAGPPAPGVGIYGTAPTIGQPIGGPLVSAVGTPVNLAAPPHMAYGVRAPVPGGVVPGAPMNMGPMVYPMPHTSAHRTTPLLSRSSTIQPHRKTIETIGRFWRSITSLLGQLLMTGDRKFQILPEERGGSLVTVSSDWCVTIILGCV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01169 367 CDD SANT 121 166 IPR001005 -
Pte11g01169 367 ProSiteProfiles Myb-like domain profile. 114 166 IPR001005 -
Pte11g01169 367 Gene3D - 9 57 - -
Pte11g01169 367 MobiDBLite consensus disorder prediction 188 220 - -
Pte11g01169 367 MobiDBLite consensus disorder prediction 188 230 - -
Pte11g01169 367 MobiDBLite consensus disorder prediction 79 118 - -
Pte11g01169 367 SMART sant 118 168 IPR001005 -
Pte11g01169 367 SMART sant 8 60 IPR001005 -
Pte11g01169 367 SUPERFAMILY Homeodomain-like 116 171 IPR009057 -
Pte11g01169 367 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Pte11g01169 367 FunFam transcription factor MYB1R1 120 171 - -
Pte11g01169 367 CDD SANT 12 58 IPR001005 -
Pte11g01169 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 170 IPR017930 -
Pte11g01169 367 Pfam Myb-like DNA-binding domain 121 166 IPR001005 -
Pte11g01169 367 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Pte11g01169 367 PANTHER TRANSCRIPTION FACTOR KUA1 7 296 - -
Pte11g01169 367 ProSiteProfiles SANT domain profile. 122 170 IPR017884 -
Pte11g01169 367 NCBIfam myb-like DNA-binding domain, SHAQKYF class 118 168 IPR006447 GO:0003677
Pte11g01169 367 Gene3D - 120 172 - -
Pte11g01169 367 FunFam Transcription factor SRM1 4 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01169 Pte-Chr11 29860075 29865678 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte11g01169 Myb_DNA-binding 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01169 - - mnt:21405871 478.018