Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01168 ATGAATGTGGAGGAAGGGGTTAGTGGTTCTGGGTGGAGCAGAGAACAAGACAAAGCATTTGAAAATGCTCTAGCAACTTATCCTGAGGATTGTTCAGATCGATGGGAGAAGATTGCCGGTGAAGTTGAAGGCAAAAGTTTAGAGGAGATTAAGTATCACTATGAGCTTTTAGTTGATGATGTAACCAGTATTGAATCTGGTTGTGTATCATTGCCCTCCTATAATTGTTTAGAGGGTTCAACCAGCAATGCTGGTGAGGAAGGAACTAGTAAGAGGGGAAATCATGGGGGACACTACACTGGCGAGTCTAATCATGGAAGCAAGGCTTCCCGGTCAGATCAGGAACGGCGAAAGGGAATTGCTTGGACAGAGGATGAGCACAGGTTATTTCTTCTTGGGTTGGAGAAATATGGAAAAGGAGACTGGAGAAGCATATCTAGGAACTTCGTTGTGACTAGAACCCCCACACAGGTCGCAAGTCATGCCCAGAAATACTTCATCCGTTTGAATTCAATGAACAAAGACAGGAGGAGATCCAGTATTCATGATATTACAAGTGTGAACAACGGAGACATTTTGGCTCCTCAAGGACCGATCACTGGCCACACAAACGGATCTGCAGGAGTTTCTGCTGGAAAATCAACCAAACAAAACCCTCAAACTCCAGCAGGCCCTCCAGCTCCAGGCGCCAAACCAATTGGAGGACCTCTTGTATCTGCTGTTGGCACACCAGTAAATCTTGCTGCTCCACCACACATGGCGTATGGGGTAAGAGCACCTGTACCTGGAGGTGTTGTTCCTGGTGCTCCAATGAACATGGGTCCAATGGTATACCCAATGCCACACACATCAGCCCATAGGACTACACCCCTGCTCAGTAGAAGCAGTACAATACAGCCACACAGGAAGACGATTGAGACTATTGGCAGATTCTGGAGGAGTATTACCAGTCTCCTAGGACAGCTACTAATGACAGGTGACAGGAAATTCCAAATTCTTCCAGAAGAGCGAGGTGGGAGCTTGGTTACAGTTAGCAGTGATTGGTTCTCCACCTTACTGTGGGGCCAGTCCCTTCACAGTCGATCACAGTCTCTTAATTTTACCCACATGCTTCACACCCGCTACAGGTCCAAGGACGACCTTAATGCCTACTCAGCTCATCAAGATCATGTAAGCGTAGTCAAAGGTTCTGTACTCCCCATCTGTGAAGATGTAATGGCTGTTGATTGGGTTGCTGAAAATCTACAAGGCGTTGGTGAATTGGGAGCAGTCGGCGCAAATGAGGAAGTGGTGAACTTGCAGAAGGAGAAGGTCAGAGAGCATGTTGAGGGTGTTTTGGTCGTTGATTATGTGATGCCATCGCCACATGTACAATCTTCAAGCCTTTAA 1389 0.4694 MNVEEGVSGSGWSREQDKAFENALATYPEDCSDRWEKIAGEVEGKSLEEIKYHYELLVDDVTSIESGCVSLPSYNCLEGSTSNAGEEGTSKRGNHGGHYTGESNHGSKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDILAPQGPITGHTNGSAGVSAGKSTKQNPQTPAGPPAPGAKPIGGPLVSAVGTPVNLAAPPHMAYGVRAPVPGGVVPGAPMNMGPMVYPMPHTSAHRTTPLLSRSSTIQPHRKTIETIGRFWRSITSLLGQLLMTGDRKFQILPEERGGSLVTVSSDWFSTLLWGQSLHSRSQSLNFTHMLHTRYRSKDDLNAYSAHQDHVSVVKGSVLPICEDVMAVDWVAENLQGVGELGAVGANEEVVNLQKEKVREHVEGVLVVDYVMPSPHVQSSSL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01168 462 Gene3D - 120 172 - -
Pte11g01168 462 Pfam Stress responsive A/B Barrel Domain 354 411 IPR013097 -
Pte11g01168 462 CDD SANT 121 166 IPR001005 -
Pte11g01168 462 ProSiteProfiles Myb-like domain profile. 114 166 IPR001005 -
Pte11g01168 462 ProSiteProfiles Stress-response A/B barrel domain profile. 305 410 IPR013097 -
Pte11g01168 462 MobiDBLite consensus disorder prediction 188 220 - -
Pte11g01168 462 FunFam transcription factor MYB1R1 120 171 - -
Pte11g01168 462 MobiDBLite consensus disorder prediction 79 118 - -
Pte11g01168 462 SMART sant 8 60 IPR001005 -
Pte11g01168 462 SMART sant 118 168 IPR001005 -
Pte11g01168 462 Pfam Myb-like DNA-binding domain 121 166 IPR001005 -
Pte11g01168 462 Gene3D - 345 411 - -
Pte11g01168 462 Gene3D - 9 57 - -
Pte11g01168 462 PANTHER TRANSCRIPTION FACTOR KUA1 7 286 - -
Pte11g01168 462 CDD SANT 12 58 IPR001005 -
Pte11g01168 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 170 IPR017930 -
Pte11g01168 462 MobiDBLite consensus disorder prediction 188 234 - -
Pte11g01168 462 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Pte11g01168 462 NCBIfam myb-like DNA-binding domain, SHAQKYF class 118 168 IPR006447 GO:0003677
Pte11g01168 462 ProSiteProfiles SANT domain profile. 122 170 IPR017884 -
Pte11g01168 462 SUPERFAMILY Dimeric alpha+beta barrel 353 413 IPR011008 -
Pte11g01168 462 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Pte11g01168 462 FunFam Transcription factor SRM1 4 71 - -
Pte11g01168 462 SUPERFAMILY Homeodomain-like 116 171 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01168 Pte-Chr11 29825084 29831511 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte11g01168 Dabb 4.3e-10 CL0032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01168 - - cave:132184506 441.81