Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01155 ATGAGTATGAACAAGCGTGACAGAATCCGTGGCCTCTTTCCCGTTTCAGTATTGTGTGTCTTCCTGTGCTGCACATCGTTACTTAGATCCGCGCTCGTGTATGCATCTCTCAAACCTGAACAACCATTTCTAGGGATCGCTCCTGAAGATGAGTCGTATTACAAAAAGGATGTAATCAAATGTAGAGATGGATCAAAGAAATTCTCGAAGCTTCAGCTCAATGACGACTTCTGCGATTGCCCTGATGGCACCGATGAACCTGGTACATCGGCATGTCCAAGAGGAAAATTCTATTGTCGTAATGCAGGCCATGTACCTCTCACCTTATTCTCTTCCAGGATCAATGATGGTATATGTGATTGCTGTGATGGGAGTGATGAGTACGATGGCAAAATGCAGTGCCCAGACACATGCTGGGAGGCCGGAAAAGTTGCTAGGGATAAACTTAAGAAAAAGATTTCCACATACCAAGCGGGTATCTTGTTACGAAAGACAGAAGTTGAAAAAGCAAAGACAGCCTTGGCCAAAGATGAGGCTGAGCTTTCAAAGTTGAAAAAAGAAGAATCTATACTGAAAGGGCTTGTGCAGAAGTTAAAAGAGCGTAAAGAACAAATAGAGAAGGCAGAGGAGAAAGAACGTCTACAGAGGGAGAAGGAAGAGAAGGAAAAAAAGGAAGCAGAACAAAAGGCAGATCAGGAGCAAAGTGAAGTCAATGCAGAAGAAAATAGGCATGAAGATGAAGCTGAAGAGCAATCTTACAGTCATGATCAAGCTGTAGAGAGTACATCTGACAATAAGATTGGTCTTCTTGATGATCCTTCTCGAGATAAGGATGCAGCTGAAGACCTCCGTCAGTTAGCTAAAGAGGAAACAGAAGTGTTAACTGACATTAATGAAAAAGAGAAGTCTTTGGTTACTGAAGCAGAACAAGATGATAAAGCAGATAACAAACCTACAGTTGAATCTGAAACTGGTCAAAAGCCTGGAGATAAGATTACTGATGCTAATGATGTTTCTGAAAATACTGAAGGATTGTCAAGGGAAGAGTTAGGCCGCCTTGTTGCTTCACGATGGACAGGTGAAAATCATGAGAAGCAGAGTGAGGGAGCTCATTCAGTAAAAGAGAATGGTAATGGAGGTCTTAAAGAGCCGCTAAAGGACACAAATGAAGAAGAATATAGTGGTTACTCTTCAGATACTGATGACGATGGCCACAGATATGATGACGATGATGTCGAGGAGGAAACTGAAGACTTCGGAGAGGAGGATCATGAAGAGCATGATTCCTCCTACAAGTCTGACACACTAGATAACTCAGATGATAGTCCCACAAGCAGTCCTTCATGGCTGGAGAAGATACAGCAAACTGTGTGGAACATTTTCCACGCTGTTAATTTCTTCCAGACCCCCGTGAACCAGACAGAGGCCACTTATATTCGTAAGCAATATGAGGAATCAAGTGACAAACTGTCTAAAATGCAATCGAAGATATCAAGTTTGACAAAGAAGCTAAGTTATGACTTTGGGCCGGAGAAGGAGTTCTATTCTTTATATAATCAGTGTCTTGAGAGCAAGCAGGACAAGTATACCTATAAAGTTTGCCCATATAAACAAGCTACTCAGGAAGAGAGTCATACCACTACTACTTTGGGGCGTTGGGACAAGTTTGAGAATTCGTATAAAGTAATGATCTTCTCAGATGGTGATAAATGCTGGAATGGGCCTGTTAGGAGTTTGCAGGTGAAGCTCAGATGCGGGCTGAAAAATGAGATAGCTGATGTAGATGAACCAAGCCGCTGCGAATATTTAGCTTTGTTAACCACTCCAGTCCTTTGCCACGAAGAAAAACTTAAGGAACTACAACATAAGTTAGACTTGATGAACAAGGAACATCCGCCTGCCCATGACGAATTGTGA 1917 0.4225 MSMNKRDRIRGLFPVSVLCVFLCCTSLLRSALVYASLKPEQPFLGIAPEDESYYKKDVIKCRDGSKKFSKLQLNDDFCDCPDGTDEPGTSACPRGKFYCRNAGHVPLTLFSSRINDGICDCCDGSDEYDGKMQCPDTCWEAGKVARDKLKKKISTYQAGILLRKTEVEKAKTALAKDEAELSKLKKEESILKGLVQKLKERKEQIEKAEEKERLQREKEEKEKKEAEQKADQEQSEVNAEENRHEDEAEEQSYSHDQAVESTSDNKIGLLDDPSRDKDAAEDLRQLAKEETEVLTDINEKEKSLVTEAEQDDKADNKPTVESETGQKPGDKITDANDVSENTEGLSREELGRLVASRWTGENHEKQSEGAHSVKENGNGGLKEPLKDTNEEEYSGYSSDTDDDGHRYDDDDVEEETEDFGEEDHEEHDSSYKSDTLDNSDDSPTSSPSWLEKIQQTVWNIFHAVNFFQTPVNQTEATYIRKQYEESSDKLSKMQSKISSLTKKLSYDFGPEKEFYSLYNQCLESKQDKYTYKVCPYKQATQEESHTTTTLGRWDKFENSYKVMIFSDGDKCWNGPVRSLQVKLRCGLKNEIADVDEPSRCEYLALLTTPVLCHEEKLKELQHKLDLMNKEHPPAHDEL* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01155 638 ProSiteProfiles MRH domain profile. 519 614 IPR044865 -
Pte11g01155 638 Coils Coil 483 503 - -
Pte11g01155 638 MobiDBLite consensus disorder prediction 207 448 - -
Pte11g01155 638 MobiDBLite consensus disorder prediction 207 254 - -
Pte11g01155 638 Gene3D - 514 612 IPR009011 -
Pte11g01155 638 Pfam Glucosidase II beta subunit-like 40 184 IPR028146 -
Pte11g01155 638 MobiDBLite consensus disorder prediction 269 320 - -
Pte11g01155 638 Coils Coil 280 300 - -
Pte11g01155 638 MobiDBLite consensus disorder prediction 327 347 - -
Pte11g01155 638 Pfam Glucosidase II beta subunit-like protein 480 638 IPR036607 -
Pte11g01155 638 Coils Coil 610 630 - -
Pte11g01155 638 MobiDBLite consensus disorder prediction 380 403 - -
Pte11g01155 638 Coils Coil 167 250 - -
Pte11g01155 638 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 17 638 IPR039794 -
Pte11g01155 638 SUPERFAMILY Mannose 6-phosphate receptor domain 516 613 IPR009011 -
Pte11g01155 638 MobiDBLite consensus disorder prediction 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01155 Pte-Chr11 29546991 29554372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01155 31 639 Calmodulin-binding Proteins AT5G56360 56.132 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01155 K08288 - qsa:O6P43_022046 714.916