Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01125 ATGGAAGAAGCAAAAGGGAAGGCAAAGTGGGATGAGAAAGAATTGGAAGAAGCAGAAGCTAAGGTGAAAATATGGAACTATGCTTTCAGATGTGTCGCGGAATTGTTTGTTAGCAGGTGTGCCATTGAGCTGGGGATAGCTGATGCTATTCAGAAACATGGACGACCCATGACACTGTCAGAGTTATCATCAGAGCTAGACTGTGCACCTTCCTATCTCCACCGCCTCATGAGGTTCCTGATGCACCGGAAGATATTCAAAATGATAAGCACCATTGATGAAGGTGTCATGGCTTACGACCAGACAGCACTCTCCCGCCTTTTGTTAAAAAATGGAGAGCAAAGCATGGCTGGAATGATCATGCTGGAGAGCAGTTCGGTTATGTTGGCACCTTGGCTAGCTCTGAGTGGGCGAGCTTTGTCCAATGGAACCCCGTCATTTGAAAAGGCTAATGGAAAAGATGTATGGAGTTATGCAGCTGAACATGCAGATCACAGTGAAATCATTAATGAAGCAATGGCCTGTGATGTTAGGGTGTCGGTGCCTGCAGTAATAGAAGGTTTCCCTGAGGCATTTGAGGGGATTGGCACTTTGGTTGATGTCGGGGGTGGCAATGGCACTTCGTTGAGGTTCTTGGTTAAGGCATTCCCTTTTATTCGTGGCATCAACTTCGATCTTCCTCATGTTGTCTCGGTGGCACAACAGTGTGATGGTGTTGAAAACGTAGGGGGTGACATGTTCCTTCGTGTTCCACAAGCTGATGCTGCATTTATCAAGTCGGTGCTACATGACTGGTCAGACGAGGATTGCATAGCTATCTTGAGGAATTGTAGAGAAGCTATCCCTAAGGAGAAAGGGAAGGTGATCATTGTTGAAGCTGTGCTTGAAGAAAAGAACGTAGATGATGAGCTAGAGGATGTGAGGTTGATGCTGGACATGGTGATGATGGCTCATACTGACTCAGGAAAGGAGAGGACTTTGAAAGAATGGGCACATGTTATTGAGAAAGCAGGGTTCAGTCGATTCACTGTGACTCCCATACATGCTGTGCAGTCTGTCATCGTTGCTTTTCCATAA 1077 0.4624 MEEAKGKAKWDEKELEEAEAKVKIWNYAFRCVAELFVSRCAIELGIADAIQKHGRPMTLSELSSELDCAPSYLHRLMRFLMHRKIFKMISTIDEGVMAYDQTALSRLLLKNGEQSMAGMIMLESSSVMLAPWLALSGRALSNGTPSFEKANGKDVWSYAAEHADHSEIINEAMACDVRVSVPAVIEGFPEAFEGIGTLVDVGGGNGTSLRFLVKAFPFIRGINFDLPHVVSVAQQCDGVENVGGDMFLRVPQADAAFIKSVLHDWSDEDCIAILRNCREAIPKEKGKVIIVEAVLEEKNVDDELEDVRLMLDMVMMAHTDSGKERTLKEWAHVIEKAGFSRFTVTPIHAVQSVIVAFP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01125 358 CDD AdoMet_MTases 197 291 - -
Pte11g01125 358 Gene3D - 7 108 IPR036388 -
Pte11g01125 358 Pfam O-methyltransferase domain 140 340 IPR001077 GO:0008171
Pte11g01125 358 Coils Coil 1 21 - -
Pte11g01125 358 SUPERFAMILY "Winged helix" DNA-binding domain 18 112 IPR036390 -
Pte11g01125 358 Gene3D Vaccinia Virus protein VP39 109 356 IPR029063 -
Pte11g01125 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 358 IPR016461 GO:0008168
Pte11g01125 358 PIRSF O-mtase 2 358 IPR016461 GO:0008168
Pte11g01125 358 PANTHER O-METHYLTRANSFERASE 35 339 IPR016461 GO:0008168
Pte11g01125 358 FunFam O-methyltransferase family protein 110 357 - -
Pte11g01125 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 355 IPR029063 -
Pte11g01125 358 Pfam Dimerisation domain 39 80 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01125 Pte-Chr11 28902076 28903512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01125 39 344 Monolignol Biosynthesis Gene Families AT5G54160 35.556 2.72e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01125 K22588 - pvy:116128403 454.136