Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01092 ATGGTCGGAGCTTCAGGAACTGGTGATGGAGGCGGCGGCAGAGGAGGTCTCCCACCGTTTCTTTTGAAAACGTATGAAATGGTCGATGACACTTCTACCGATGATATCATCTCTTGGAGTTACAGCCAGAAGAGCTTTCTGGTCTGGAACCCACCAGAACTGTCAAGGCTTCTTCTTCCCACTTACTTCAAGCACAACAACTTCTCCAGCTTCATCAGACAGCTCAACACCTATGGATTCAGAAAAATAGACCCTGAACGTTGGGAATTTGCCAATGAAGATTTTGTGAAAGGTCAAAAGAACCATCTTAAGAACATTTATCGCAGGAAACCTATCCATAGTCACAGTCACCCTCCAGGTTCCCTTGTTGATGCTGAAAGAGCTGCGCTCGATGAAAAAATAAGTAGGCTTTCCCGTGAGAGAGCTGGACTTCAGTCCGATATATTAAGTATCAAACAGCAGAAATCGGCTTTGAGGCTTCAGTTCGATGACCTAAGTAAGAGGATTGATGGAATGGAGAAGAGACAAGAGGATGTACTGAACTTTTTTGACAAGGCTCTTCGGAAACCTACTGTTGTTGAACATCTTCTGCAGAAAATACAGTCTGTGGACGCGTCAGCATATAACAAAAAAAGGCGACTACCTGAGGCTGGCCAGTCGCTTCCATTTTCTGAGAATGATTTTATAGACGTTTGCAGAAACAGTAGACCTGAATTTGGAAATATTGTCCACCTCAATTTTTTTGATAAACTCAGACTTGAATTATCACCAGCTATTTCAGATAAGAACTTGGTGTCACTTAGCACACAAAGTTCAAATGAAGATGGGAGAAGTGCGGAGAGGATCATATCTGAAGAACACAAAGTAGTGCAGACAACCCCAGAGACTCTGGTATTTCCACCCGAAAGCTTCGACTTTTCAGATTATGGGATATCTTTCACATTTAAAATGAATTCACCTTCATCACAAATACCAGTAATTCAAGATAGCGCAAGACCGCATTCTTTGCAACCGAGTTTAAGCTCAACTGATGAAGGCGATGTTCACCTATCCTGCCATTTGAACTTGACTCTGGCATCTTGTCCTTCTTACATGGATGAGAATTATTTAACTAAGTTGCCTCGAACTGGTAATCAGGAAATGAGAAAATTCTCAGATCCAAAGTGTCATGGCAATGGGAAAGAATCCAGTAATAAAGTATCTTCATGCCAAAACCCGATCAGGGAGGTGGTAAGTTTATCTTCATCGAAAGGATTGCAACATAATAGTCAAGATCAAGCTCCAGTTAGAGTGAATGATTTATGCTGGGAACAATTTCTTACAGAAAGACCTGGATATGCAGATAACGAAGAAGCACATTCCAATAATAATGCAAAAAATGTGACCAAGGAGAGGATGGAAGGTTCAGTCATGTCATTTCTAAAGATATAA 1431 0.4137 MVGASGTGDGGGGRGGLPPFLLKTYEMVDDTSTDDIISWSYSQKSFLVWNPPELSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKGQKNHLKNIYRRKPIHSHSHPPGSLVDAERAALDEKISRLSRERAGLQSDILSIKQQKSALRLQFDDLSKRIDGMEKRQEDVLNFFDKALRKPTVVEHLLQKIQSVDASAYNKKRRLPEAGQSLPFSENDFIDVCRNSRPEFGNIVHLNFFDKLRLELSPAISDKNLVSLSTQSSNEDGRSAERIISEEHKVVQTTPETLVFPPESFDFSDYGISFTFKMNSPSSQIPVIQDSARPHSLQPSLSSTDEGDVHLSCHLNLTLASCPSYMDENYLTKLPRTGNQEMRKFSDPKCHGNGKESSNKVSSCQNPIREVVSLSSSKGLQHNSQDQAPVRVNDLCWEQFLTERPGYADNEEAHSNNNAKNVTKERMEGSVMSFLKI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01092 476 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 260 IPR027725 -
Pte11g01092 476 PRINTS Heat shock factor (HSF) domain signature 20 43 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte11g01092 476 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte11g01092 476 PRINTS Heat shock factor (HSF) domain signature 58 70 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte11g01092 476 ProSitePatterns HSF-type DNA-binding domain signature. 59 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte11g01092 476 Pfam HSF-type DNA-binding 20 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte11g01092 476 SUPERFAMILY "Winged helix" DNA-binding domain 16 109 IPR036390 -
Pte11g01092 476 SMART hsfneu3 16 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte11g01092 476 FunFam Heat shock transcription factor 1 13 110 - -
Pte11g01092 476 Coils Coil 127 175 - -
Pte11g01092 476 Gene3D - 14 110 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01092 Pte-Chr11 28432573 28435134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01092 20 471 HSF AT4G13980 50.000 3.55e-138 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte11g01092 HSF_DNA-bind 4.7e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01092 K09419 - qsa:O6P43_002600 519.62