LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte11g01080	ATGAAGCAGAGTGCCACTGAGCTTTGTGAATCAAAACCAGAAACAATGGAAGGAGACCATGTGGATAACATAACTCTGGTTGCCATCGATAGAGACAAGAACAGCCACCATGCTGTCATGTGGGCTGTGGACAACATTCTAGCCAAGAACTCAACTTGTGGCCTTATTCATGTTGGAACTCACAGGTTGCATCCTCAAGATACTGTCTCCAAAGAACCTCGACCACCAACTGAAGCAGAACAACAATTTTTTCTTCCTTTCCGAGGATTCTGTGCTCGAAAGGGGGTTGCAACAATGGAGTTGGTTCTCGATGATATTGACGTCTCAAAAGCAGTCGCTCATTATGTTGCCAACAACTCCATCAACAATGTTGTTGTTGGTGCTTCTCACAGGAATGTACTCACAAGGAAATTCAAAAATCCAGATGTTCCATCATGCCTGCTCAAATCTTTGCCGGAGTCTTGTACATTATACGTTATATCCAAAGGAAAAGTACAAAATTTTCGTTGTGGAGTTCCATCGCGGAGCATTTCGATTGTGAAAGAAAAAGGCTTGACCGATGTAGCCACTCACATGAAACATTCTCAACAGGTCAAATCCCCTAGACCGCTTCTTGATAGTCCAGATTATGGAGATGCAAACAGGACAATGTTCAATATGTGGAGTTTTAGAAGCAAGGGATCTCTCGATGGGGTTGCTGATACTAAGCAGCTGACACCAACCAAGTCTAAACGAAATTTTGATTCAATATTAGAATCAACAGAATGCCCCTCTTCAGGCAATTCTCCACATCACGAGCCTCTATCAAGAAAGGGTGACATCTTAGAGCAACCTTCTTCTCAATCATCAGATATGTCCTGTGAAGCCTTTCCTGTGGTTCCTGAAAATTCCCAGACCACAAAAGCATTGGAAGCTGAGATGATGAGATTGAAACTTGATCTGGAACAAACCACGGATAAGTATCACTCAGTCTGCAGAGAAGCCACTACAGCAGACAAGGCGGCAAGGAGGCTTCAATTCCAGAGAGCAGAAGAAGAACGCAATTTAGTAGAAGCTAGGCTTGCTGAAGACGCTGCAGCATTTGCTCTGGCAGTATTAGAGAAGCAGAAAACCCAGTCTGCATTGGAATCGGTGCGTATATCAGAACGCCTGGTAGAAATGGAGATTCAGAAGAGGATAAAAGCAGAAATCAAAGTCAAGCTTGAGGAAGAAGAAAGAAAAACACTGCGTTCAAAAACGCTATACAGTGTTAGATTCAGAAGATATACTATTGATGAGATAGAAAAAGTAACAAATTACTTCGAAGCTTCTTTTAAAATTGGAGAAGGGGGATATGGACCTGTCTATAAAGCAGTTCTTGATCACACTGATGTTGCTATCAAAGTTTTGAGACCAGACATATCCTGTGGACAGATGCAATTCCAGAGAGAGGTGGAGGTTTTGAGCAACATGAGGCATCCAAACATGGTTCTCCTCTTAGGTGCATGCCCCGAGTATGGATGCCTTGTGTATGAATACATGGAAAATGGCAGCTTAGAAGACAGGCTTCTGATGCAAAATGACACTCCCCCAATTCCTTGGAGAACAAGATTCAAAATAACAGCTGATATTGCCGCTGCCCTTAATTTTCTTCATCAGAAAAAACCAGAACCCCTTGTGCACCGTGATCTTAAGCCAGCAAACATTCTCTTAGACCACAACTACGTCAGCAAGATTGGTGATGTGGGATTGGCCAGGCTAGTTCCAGCATCTCTAGCTGATCAAACAACACAGTACTGCATAACAGCAGCAGCTGGCACATTTTGTTACATTGATCCAGAGTATCAACAGACAGGAAAACTAGGAGTGAAGTCCGATATTTACTCATTAGGTATAGTGCTGCTGCAAATTATTACAGCGAAGCCTCCTATGGGATTGTCTCACCAAGTAGAGATGGCTATTGAAGAAGGGACATTTGCAGAGATGCTTGACCCAGCTGTAGTGGATTGGCCATTTGAAGAAACACTTTCTTTTGCTAAATTGGCTTTGAAGTGTTGCGAGCTCAGGAAGAGGGACAGACCGGACCTGGATTCTGTAATCTTGCCAGAGCTGAATCGTCTGAGACATCTTGGAATGAACGAAGAAACTACGGACATTCAATCAAACACGTACAAGCCACTTCCACATCACTCATCAATTTCTGAAGTGACGTGCAATAAGATCAAATTGAAAACAAAGCAGTACCCCAGCAAATCCATTACTAAATCGGGAAGCTTCAGTTGTAGTCGTGGGGTTTCAAGACTGTTGCCACCTACAACTGATATGCAAGAAGGGAAAGCAAGCAAGAAGTATACTGAAAGCTGCTGGTCATTTGTAAGTTGCTCCAACCAAGAACCTCCGTTGCAGAAATTCAAGTCATTTGTGAGTTGCTCCAAACATGAGCCTCCATTACAGAAATTCAATTCATTCATGTATTGA	2457	0.4286	MKQSATELCESKPETMEGDHVDNITLVAIDRDKNSHHAVMWAVDNILAKNSTCGLIHVGTHRLHPQDTVSKEPRPPTEAEQQFFLPFRGFCARKGVATMELVLDDIDVSKAVAHYVANNSINNVVVGASHRNVLTRKFKNPDVPSCLLKSLPESCTLYVISKGKVQNFRCGVPSRSISIVKEKGLTDVATHMKHSQQVKSPRPLLDSPDYGDANRTMFNMWSFRSKGSLDGVADTKQLTPTKSKRNFDSILESTECPSSGNSPHHEPLSRKGDILEQPSSQSSDMSCEAFPVVPENSQTTKALEAEMMRLKLDLEQTTDKYHSVCREATTADKAARRLQFQRAEEERNLVEARLAEDAAAFALAVLEKQKTQSALESVRISERLVEMEIQKRIKAEIKVKLEEEERKTLRSKTLYSVRFRRYTIDEIEKVTNYFEASFKIGEGGYGPVYKAVLDHTDVAIKVLRPDISCGQMQFQREVEVLSNMRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLLMQNDTPPIPWRTRFKITADIAAALNFLHQKKPEPLVHRDLKPANILLDHNYVSKIGDVGLARLVPASLADQTTQYCITAAAGTFCYIDPEYQQTGKLGVKSDIYSLGIVLLQIITAKPPMGLSHQVEMAIEEGTFAEMLDPAVVDWPFEETLSFAKLALKCCELRKRDRPDLDSVILPELNRLRHLGMNEETTDIQSNTYKPLPHHSSISEVTCNKIKLKTKQYPSKSITKSGSFSCSRGVSRLLPPTTDMQEGKASKKYTESCWSFVSCSNQEPPLQKFKSFVSCSKHEPPLQKFNSFMY*	819

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte11g01080	818	Gene3D	Phosphorylase Kinase; domain 1	414	506	-	-
	Pte11g01080	818	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	407	506	-	-
	Pte11g01080	818	Coils	Coil	387	412	-	-
	Pte11g01080	818	Pfam	Protein kinase domain	437	691	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte11g01080	818	Coils	Coil	300	320	-	-
	Pte11g01080	818	Gene3D	Transferase(Phosphotransferase) domain 1	507	718	-	-
	Pte11g01080	818	SMART	serkin_6	434	697	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte11g01080	818	SUPERFAMILY	Protein kinase-like (PK-like)	409	693	IPR011009	-
	Pte11g01080	818	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	26	139	-	-
	Pte11g01080	818	MobiDBLite	consensus disorder prediction	232	287	-	-
	Pte11g01080	818	ProSiteProfiles	Protein kinase domain profile.	434	705	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte11g01080	818	Coils	Coil	335	355	-	-
	Pte11g01080	818	Gene3D	HUPs	23	160	IPR014729	-
	Pte11g01080	818	Pfam	Universal stress protein family	26	136	IPR006016	-
	Pte11g01080	818	CDD	STK_N	27	163	-	-
	Pte11g01080	818	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	552	564	IPR008271	GO:0004672\|GO:0006468
	Pte11g01080	818	PANTHER	OS02G0152300 PROTEIN	25	720	-	-
	Pte11g01080	818	MobiDBLite	consensus disorder prediction	232	265	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte11g01080	Pte-Chr11	28104791	28109764	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte11g01080	27	704	Receptor kinase-like Gene Family	AT1G78940	46.770	0.0	589

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Pte11g01080		Pkinase	6.3e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte11g01080	-		-	qsa:O6P43_018341	801.201