LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte11g01068	ATGCAGAGGCAGGGTATTTATAAGGAGGGGAGCTCCTCTGTTAGTAGGGACAAAAGGAGTTTGGAAAGTGGAGAAGATGAGCAGCCAGAAAGAAAGAGGCCGGCCTTGGCTAGCGTGATTGTAGAAGCGCTCAAGGTGGATAGTTTGCAGAAATTGTGCTCATCATTGGAACCCATTCTTCGTAGAGTTGTCAGTGAGGAAGTGGAACGTGCTCTGGCAAAGTTAAGCCCAGCAAAACTTAACGGAAGATCTTCCCCCAAAATGCTTGAATGTCCGGATGTCAGCTTGCAGCTGCATTTTAGGACCAGACTATCTCTGCCCCTTTTCACTGGAGGAAAAGTTGAAGGGGAGCAGGGTGCGTTAATTCATGTAGTTCTGGTAGATGCGAACACTGGCAAGGTTGTAACAACTGGACCTGAGGCCTCTGCTAAACTAGATGTGGTTGTACTTGAAGGTGATTTCAACAATGAAGACGATGAAGAATGGACTCAAGAAGAATTTGAAAGTCATGTAGTGAAAGAACGTGAAGGGAAGAGACCTTTGTTGACTGGGGACTTGCAAGTAACCCTTAAGGAAGGGGTAGGGACACTGGGGGAACTTACCTTTACTGATAACTCAAGTTGGATAAGGAGCAGAAAGTTCAGGTTAGGCTTGCGGATTGCCTCAGGATTTTGTGATGGTATACGCATCCGTGAAGCTAAGACAGAGGCTTTTACAGTTAAAGACCACAGGGGAGAATTATACAAGAAACACTATCCACCTGCCTTGAATGATGAAGTGTGGAGATTGGAGAAGATTGGTAAAGATGGTGCATTTCACAAGAAGCTGAATAGTGCTAATATATTCACTGTTGAAGGTTTTCTTCGCCTTGTGGTCCGGGATCCTCAAAAGTTACGAAATATTCTCGGGAGTGGTATGTCAAATAAAATGTGGGATGCTCTGGTAGAGCATGCAAAGACTTGTGTCTTGAGTGGGAAGTATTATTATGTCTATCATCCAGAGGATGCAAGGAACATTGGTGTCGTTTTCAACAACATCTATGAGCTGGCTGGGCTTATCATCGATGAGCAATACCATTCTGCTGATTCTCTTTCTGACAGCCAGAAGGATTATGTAGATTCCCTTGTGAAAAAAGCATATGAGAACTGGGATCGGGTCATAGAGTATGATGGCAAATCTCTTCTGGCCTTCGAGCAAAATAAGAGGTCTACTGTACCTCAGAATGATCTCCCTTTGGAGGCAATTGATTACTCAAATATGGATAATCAGCTGGCAGTGCGGGGTCAAGCAGTTATTTCTTCTGATCAGCACATTAGTTCAGGACTAACAGTTGAAGGTAAAAGTTGGTTGAATTATTCTTTATATGTGCGGGCTTTATTCTCGACTCTCTTATTGTTGGTTGCATATGATATCTTATGTGTTTCACATTCAGAGTATGTCTGA	1443	0.4345	MQRQGIYKEGSSSVSRDKRSLESGEDEQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLSPAKLNGRSSPKMLECPDVSLQLHFRTRLSLPLFTGGKVEGEQGALIHVVLVDANTGKVVTTGPEASAKLDVVVLEGDFNNEDDEEWTQEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLRIASGFCDGIRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGAFHKKLNSANIFTVEGFLRLVVRDPQKLRNILGSGMSNKMWDALVEHAKTCVLSGKYYYVYHPEDARNIGVVFNNIYELAGLIIDEQYHSADSLSDSQKDYVDSLVKKAYENWDRVIEYDGKSLLAFEQNKRSTVPQNDLPLEAIDYSNMDNQLAVRGQAVISSDQHISSGLTVEGKSWLNYSLYVRALFSTLLLLVAYDILCVSHSEYV*	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte11g01068	480	PANTHER	OS02G0177800 PROTEIN	18	438	IPR012416	GO:0005516
	Pte11g01068	480	Pfam	Calmodulin binding protein-like N-terminal domain	96	243	IPR046831	-
	Pte11g01068	480	MobiDBLite	consensus disorder prediction	1	33	-	-
	Pte11g01068	480	MobiDBLite	consensus disorder prediction	12	33	-	-
	Pte11g01068	480	Pfam	Calmodulin binding protein C-terminal domain	328	389	IPR046829	-
	Pte11g01068	480	Pfam	Calmodulin binding protein central domain	255	321	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte11g01068	Pte-Chr11	27464924	27469870	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte11g01068	18	415	Calmodulin-binding Proteins	AT4G25800	78.055	0.0	633

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte11g01068	-		-	tcc:18589220	691.804