Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01053 ATGGAAAGAGCTGAGAGAGGCACCGTCTCATTCTCAAATACCCCACAAGCAATCCATGATATCGGTTTTATCCAATTTGAAGAAAACCAGGTTCTTAGCTTTTTAGCTCCTTCGCAGTCACAGTCATCCACTCGGTTATCTCAACAACAATTAAATGGAGGAGCAAACACCGCTGCCATGAAAGCCGCCACTGCCTCAACCATGGGCTTTAGTCATAACAACCTTGCTACAAGAAGTTCTTGGAATAGTGAACAGGTGGAGATACTGGAACACCCCAAAGTTGTCAGTGATGAAAATGGGACTGGTAATTCTAGTGATGGCAACGATACATGGTGGAAGAGTGCAGCCTCAGAAAAAAGCAAAGTGAAAGTAAGGAGGAAGCTGAGAGAGCCAAGGTTCTGTTTCCAAACAAGAAGTGATGTAGATGTACTTGATGATGGTTACAAGTGGAGGAAGTATGGCCAGAAGGTTGTCAAGAATAGTCTTCATCCAAGAAGCTATTACAGGTGCACCCACAGTAACTGCCGAGTGAAGAAGAGAGTTGAACGCCTATCTGAAGATTGTCGTATGGTGATAACAACCTATGAAGGCAGACACAACCACTCTCCATCTGACGATACAAATTCATCGGAACATGAATGTTTTTTTTCCTTCTAA 657 0.4338 MERAERGTVSFSNTPQAIHDIGFIQFEENQVLSFLAPSQSQSSTRLSQQQLNGGANTAAMKAATASTMGFSHNNLATRSSWNSEQVEILEHPKVVSDENGTGNSSDGNDTWWKSAASEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPSDDTNSSEHECFFSF* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01053 218 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 205 IPR044810 GO:0003700
Pte11g01053 218 FunFam WRKY transcription factor 57 130 204 - -
Pte11g01053 218 ProSiteProfiles WRKY domain profile. 139 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g01053 218 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g01053 218 SUPERFAMILY WRKY DNA-binding domain 136 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g01053 218 MobiDBLite consensus disorder prediction 199 218 - -
Pte11g01053 218 Gene3D WRKY domain 130 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g01053 218 SMART WRKY_cls 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01053 Pte-Chr11 26541717 26546037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01053 23 219 WRKY Transcription Factor Family AT2G44745 58.333 5.94e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte11g01053 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01053 - - var:108347245 322.783