Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01051 ATGGGTTGCTGTTTCAGTGCGAGAATCAAAGCTGAGAGTCCACCCCACAAGGGATTGACTTCAATCTGTGGCATTAAAGATGTTGACTCTTTCAGTGGCTGTGCAAGCAAGGTCTCTGTCTCATCAGTGCCTCCAACTCCTCGAACTGAGGGTGAGATCTTGCAGTCATCCAATTTGAAAAGCTTCTCCTTCAATGATCTAAGAAATGCAACACGAAACTTTCGGCCAGATAGTGTGGTGGGTGAAGGAGGATTTGGCTGTGTATTCAAGGGGTGGATAGATGAGCGCACACACGCACCTGTCAGACCTGGTACTGGAATGGTCATCGCTGTGAAGAGGCTTAACCAAGAAGGCCTGCAGGGTCATAGCGAATGGTTGACTGAGATCAACTACCTGGGACAGCTACATCATTCTAACCTTGTTAAAATGATTGGTTACTGCATAGAGGATGACCAGAGACTTTTGGTTTATGAATTTTTGCCCAAGTGTAGTTTGGACAACCACCTGTTCAGGAGAGCTTCTTACATTCAACCTCTTTCTTGGAACCTCCGGATGAAGATTGCACTTGATGCTGCAAAAGGTCTTGCATTTCTTCATGGCGATAAGGCCAGAGTGATATACAGAGATTTGAAAACTTCTAATATACTGCTTGACTCGAATTATAATGCCAAGCTCTCTGATTTTGGATTGGCAAAGGATGGACCCCCAGATGATAAAAGTCACGTCTCTACAAGGATCATGGGAACTTATGGCTATGCAGCTCCTGAATATATGGCCACAGGTCATCTGACTAAGAAAAGCGATGTATACAGTTTTGGGGTTGTCCTTCTGGAAATTTTAGCTGGGAGAAGAGTGTTGGATAAAAACAAACCGCCTGGGGAGCATAACTTAGTTGAATGGGCGAAGCCTTACCTTACTAGCAAACGCAGAATCTTTAGAGTCATGGATGTTGGTATGGAAGGACAGTATTCACTGGAAGAAGCATTAAAAGTAGCTGATCTAGCCATTCGATGCCTCTGTATGGAACCCAGGTTTAGGCCTGATATGAATGAAATTGTTAGAACATTAGAACAGCTTCAAAACTCGAATCGTACAGGTGGATTAGGTGGCTCTAAAAATCAGACCTACCAAACAAAGAGTAGCAATCATCACTCAAGTAATGGTCACAGACATCAAAGAAGAAGTATCAATGAAAATTTCAACAGGGAAGTCAAGTCTCATTACAAACCATCTCCTGTTGTGCTTCATACATGA 1254 0.433 MGCCFSARIKAESPPHKGLTSICGIKDVDSFSGCASKVSVSSVPPTPRTEGEILQSSNLKSFSFNDLRNATRNFRPDSVVGEGGFGCVFKGWIDERTHAPVRPGTGMVIAVKRLNQEGLQGHSEWLTEINYLGQLHHSNLVKMIGYCIEDDQRLLVYEFLPKCSLDNHLFRRASYIQPLSWNLRMKIALDAAKGLAFLHGDKARVIYRDLKTSNILLDSNYNAKLSDFGLAKDGPPDDKSHVSTRIMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEILAGRRVLDKNKPPGEHNLVEWAKPYLTSKRRIFRVMDVGMEGQYSLEEALKVADLAIRCLCMEPRFRPDMNEIVRTLEQLQNSNRTGGLGGSKNQTYQTKSSNHHSSNGHRHQRRSINENFNREVKSHYKPSPVVLHT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01051 417 SMART serkin_6 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01051 417 MobiDBLite consensus disorder prediction 361 417 - -
Pte11g01051 417 Gene3D Transferase(Phosphotransferase) domain 1 160 383 - -
Pte11g01051 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pte11g01051 417 SUPERFAMILY Protein kinase-like (PK-like) 50 358 IPR011009 -
Pte11g01051 417 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 160 367 - -
Pte11g01051 417 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Pte11g01051 417 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Pte11g01051 417 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Pte11g01051 417 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01051 417 PANTHER OS01G0588500 PROTEIN-RELATED 46 360 - -
Pte11g01051 417 MobiDBLite consensus disorder prediction 361 383 - -
Pte11g01051 417 CDD STKc_IRAK 80 359 - -
Pte11g01051 417 MobiDBLite consensus disorder prediction 391 405 - -
Pte11g01051 417 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01051 Pte-Chr11 26460408 26463705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01051 52 356 Glycoside Hydrolase AT3G07070 50.163 2.15e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte11g01051 PK_Tyr_Ser-Thr 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01051 - - gmx:100775335 609.757