Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01044 ATGGAATTGAAGACTGGAAAGCTAGTTAGGTTTTTATCTGATGGGAAAAAGAAGAAAGACCGAGTGTGGTGTAGTACTGATGGTTCAGTACTTGGAAAGTCATCATCTGCAAAATCTGATTCCTTGCCAAGTCATATTCAGTTTCTTCAGGGAAAGAACAGAATAACGGAAACATGTATGGCTGGAAAATCCAAGGTATTTCCAGAGAACCATGGACCGTGGCGTAAAAGAATACTTGATCCTGGTAGTGAGGTTGTATTGACATGGAACCGTATCTTCATCATGTCATGCTTGGTTGCTCTCTTTGTTGACCCTCTATACTTCTACTTGCCTACCATGAGAGGGAATGATGACTCTCGATGTGTGAGGACTGACCTGAGCCTGCGAATTATTGTAACATTTTTCAGAACTATTGCCGATGTATTTTATCTGCTTCACATGATTATAAAGTTCAGAACAGCATATATTGCTCCAAGCTCTCGGATATTTGGGAGAGGTGAGCTTGTCATGGACTCCAAAAAAATTGCAAAGAGATATGTCAAATCCAATTTCTTCATTGATCTCATCGCTATGCTGCCTCTTCCACAGATGGTCATATGGTTTGTCATACCAGCAACAAGAACTCCCCAAAGTGATCATAGCAACAATGCCCTTGCACTGATTGTTTTGCTTCAATATATTCCCCGGTTGTATTTGATATTTCCCTTAAGTTCTCAAATAATAAAAGCAACGGGAGTGGTTACAAAGACTGCCTGGGCAGGTGCTGCATATAATCTGCTATTATATATGTTGGCTAGCCATGTTTTAGGTGCAGCATGGTATGTTTTATCAGTTGACCGGTACACTGCATGCTGGAAATCCTTCTGCAGAAGTGAATTTATGCCGCAAAAATGCTTGCTTACTTATTTGGATTGTGATTCCCTTAATCTCAATGCACGCAAGTCTTGGGCTAATACTACGGATGTGTTTAAGAACTGCAATCCTAATAACAGCAATTTCAACTATGGCATATTCGAGAATGCAGTGACCAAGAATGTTGTCTCCAGTAATTTCATCAGAAAGTACTTCTATTGTTTATGGTGGGGCTTACAAAACCTCAGCTCATACGGACAGAACTTGTCAACAACAACCTATATCAGAGAGACGGCATTTGCCATTTTGATCGCCATATTGGGTCTTGTATTGTTTTCCCATTTGATTGGAAACATGCAGACATATTTGCAATCAATCACTGTGAGACTTGAGCAATGGAGGCTTAAGCTAAGAGACACTGAGGAATGGATGAGGCATCGCCAACTCCCTGAAGATTTGCGACAACGTGTTCGACGTTTTGTTCAATATAAATGGGTTGCAACTCACGGAGTGGATGAAGAAACCATTTTGCATGGATTACCTGCTGATCTTCGGCGTGACATTCAGCGCCACCTTTGCCTCGACCTCGTTCGACGTGTTCCCTTCTTCTCACAAATGGATGATCTGCTGCTTGATGCAATATGTGAGCGTTTAGTTTCTTCTTTAAGTACAGAGGGAACATACATTGTCCGTGAGGGTGATCCTATCACTGAGATGCTTTTCATTATCAGGGGTAGGCTGGATAGTTCTACCACAAATGGTGGGCGTACTGGTTTCTTCAACTTAATTACATTGAGACCTGGAGATTTTTGCGGGGAGGAACTGCTCACATGGGCCTTACTCCCAAAATCAACTGGAAATCTGCCTTCTTCAACTAGAACTGTCAGAGCTCTCACTGAGGTAGAAGCATTCGCATTGCGAGCCGAAGATCTAAAGTTTGTAGCTAATCAGTTCAGACGTTTGCACAGCAAGAAGCTGCAGCATACGTTCAGATTTTACTCCCATCATTGGAGGACATGGGCAGCTTGCTTCATACAGGCTGCCTGGCGCAGTTACAGGAAAAGGATGTCTTCCAAGAATCTCACAATGAGAGAGTCCTTCAAACATGATGAAGAACGGGAGGAAGAAGAGCGTGTGGCTGCTAAATTAGACACTTCTCAAGCTAAGGTGAACCTTGGGGTCACATTACTGGCTTCTAGATTTGCTGCAAACACAAGAAGAGGAGTGCAGAAATTCAAAGATGAAATGCCTAAATTACGAAAGCCTGAAGAACCAGACTTTTCTGCTGAACCTGATGATCATTAG 2157 0.4233 MELKTGKLVRFLSDGKKKKDRVWCSTDGSVLGKSSSAKSDSLPSHIQFLQGKNRITETCMAGKSKVFPENHGPWRKRILDPGSEVVLTWNRIFIMSCLVALFVDPLYFYLPTMRGNDDSRCVRTDLSLRIIVTFFRTIADVFYLLHMIIKFRTAYIAPSSRIFGRGELVMDSKKIAKRYVKSNFFIDLIAMLPLPQMVIWFVIPATRTPQSDHSNNALALIVLLQYIPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYVLSVDRYTACWKSFCRSEFMPQKCLLTYLDCDSLNLNARKSWANTTDVFKNCNPNNSNFNYGIFENAVTKNVVSSNFIRKYFYCLWWGLQNLSSYGQNLSTTTYIRETAFAILIAILGLVLFSHLIGNMQTYLQSITVRLEQWRLKLRDTEEWMRHRQLPEDLRQRVRRFVQYKWVATHGVDEETILHGLPADLRRDIQRHLCLDLVRRVPFFSQMDDLLLDAICERLVSSLSTEGTYIVREGDPITEMLFIIRGRLDSSTTNGGRTGFFNLITLRPGDFCGEELLTWALLPKSTGNLPSSTRTVRALTEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRSYRKRMSSKNLTMRESFKHDEEREEEERVAAKLDTSQAKVNLGVTLLASRFAANTRRGVQKFKDEMPKLRKPEEPDFSAEPDDH* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01044 718 Gene3D Jelly Rolls 484 604 IPR014710 -
Pte11g01044 718 ProSiteProfiles cAMP/cGMP binding motif profile. 486 616 IPR000595 -
Pte11g01044 718 SUPERFAMILY Voltage-gated potassium channels 84 408 - -
Pte11g01044 718 PRINTS EAG/ELK/ERG potassium channel family signature 449 456 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte11g01044 718 PRINTS EAG/ELK/ERG potassium channel family signature 399 408 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte11g01044 718 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte11g01044 718 PRINTS EAG/ELK/ERG potassium channel family signature 381 392 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte11g01044 718 PRINTS EAG/ELK/ERG potassium channel family signature 147 156 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte11g01044 718 PRINTS EAG/ELK/ERG potassium channel family signature 355 372 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte11g01044 718 Gene3D - 92 412 - -
Pte11g01044 718 Pfam Cyclic nucleotide-binding domain 509 597 IPR000595 -
Pte11g01044 718 Gene3D Helix hairpin bin 413 477 - -
Pte11g01044 718 SMART cnmp_10 486 617 IPR000595 -
Pte11g01044 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 64 711 - -
Pte11g01044 718 CDD CAP_ED 486 617 IPR000595 -
Pte11g01044 718 FunFam Cyclic nucleotide-gated ion channel 1 413 477 - -
Pte11g01044 718 Pfam Ion transport protein 88 413 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte11g01044 718 FunFam Cyclic nucleotide-gated ion channel 1 484 602 - -
Pte11g01044 718 SUPERFAMILY cAMP-binding domain-like 416 608 IPR018490 -
Pte11g01044 718 MobiDBLite consensus disorder prediction 692 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01044 Pte-Chr11 26261995 26266613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01044 1 717 Ion Channels AT4G30360 69.863 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01044 K05391 - mnt:21395192 1130.93