Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01037 ATGCCTATTCCTTATCAACGCCACACCTACCATGTCACATGTCCTGGCGGCGGTACCGGCGGAGCCCCCAAACCACCCAACTGCAGCCATTTTCCATCACCGCCACCGAAACGAAAACCAAAGTTCTTATCTTTCCTTCTCAAACCGATAATCATGATACTCCTCACCTCTTTCTTCTTCCTCTTTCTGGGTTTCGCTGCAATCATCCTCATCCATCTGTGCCTCGTCGCTGGCATCTTTCACCGCCTTCGTATCCGACAGAGTAACACTCTTCAATTGGACAATTTCTCGAATGGGTTAACGCCTCATGACCTGAAAAGGCTTCCCCAGTTCAGGTTAGCTAAAGGGGTTGACCCAAGATCCGGAACACACTGTGTGGTCTGCCTGGATGGCTTCAGAATTGACCAATCGTGTAGAAAGCTCCCACGATGTGCTCACGTATTTCATAGAAAGTGTGTAGATGCGTGGCTTCTCAAGGTGGCTGCTTGTCCAATTTGCAGAACGAATGTTCGGTTGAAAGTAGGTTCTATAATGGCCGTGGAACAAGATAGCAGGACGATAAGCAGCTGCGACAACTGGTAG 582 0.4914 MPIPYQRHTYHVTCPGGGTGGAPKPPNCSHFPSPPPKRKPKFLSFLLKPIIMILLTSFFFLFLGFAAIILIHLCLVAGIFHRLRIRQSNTLQLDNFSNGLTPHDLKRLPQFRLAKGVDPRSGTHCVVCLDGFRIDQSCRKLPRCAHVFHRKCVDAWLLKVAACPICRTNVRLKVGSIMAVEQDSRTISSCDNW* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01037 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 174 IPR013083 -
Pte11g01037 193 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Pte11g01037 193 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 34 179 - -
Pte11g01037 193 Pfam Ring finger domain 124 167 IPR001841 -
Pte11g01037 193 SUPERFAMILY RING/U-box 124 174 - -
Pte11g01037 193 SMART ring_2 125 166 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01037 Pte-Chr11 26170290 26171480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01037 41 170 C3H Transcription Factor Family AT4G30370 43.077 3.10e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01037 - - qsa:O6P43_022264 162.155